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Estimation of Thalamocortical and Intracortical Network Models from Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the Rat Barrel System
A new method is presented for extraction of population firing-rate models for both thalamocortical and intracortical signal transfer based on stimulus-evoked data from simultaneous thalamic single-electrode and cortical recordings using linear (laminar) multielectrodes in the rat barrel system. Time...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2653726/ https://www.ncbi.nlm.nih.gov/pubmed/19325875 http://dx.doi.org/10.1371/journal.pcbi.1000328 |
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author | Blomquist, Patrick Devor, Anna Indahl, Ulf G. Ulbert, Istvan Einevoll, Gaute T. Dale, Anders M. |
author_facet | Blomquist, Patrick Devor, Anna Indahl, Ulf G. Ulbert, Istvan Einevoll, Gaute T. Dale, Anders M. |
author_sort | Blomquist, Patrick |
collection | PubMed |
description | A new method is presented for extraction of population firing-rate models for both thalamocortical and intracortical signal transfer based on stimulus-evoked data from simultaneous thalamic single-electrode and cortical recordings using linear (laminar) multielectrodes in the rat barrel system. Time-dependent population firing rates for granular (layer 4), supragranular (layer 2/3), and infragranular (layer 5) populations in a barrel column and the thalamic population in the homologous barreloid are extracted from the high-frequency portion (multi-unit activity; MUA) of the recorded extracellular signals. These extracted firing rates are in turn used to identify population firing-rate models formulated as integral equations with exponentially decaying coupling kernels, allowing for straightforward transformation to the more common firing-rate formulation in terms of differential equations. Optimal model structures and model parameters are identified by minimizing the deviation between model firing rates and the experimentally extracted population firing rates. For the thalamocortical transfer, the experimental data favor a model with fast feedforward excitation from thalamus to the layer-4 laminar population combined with a slower inhibitory process due to feedforward and/or recurrent connections and mixed linear-parabolic activation functions. The extracted firing rates of the various cortical laminar populations are found to exhibit strong temporal correlations for the present experimental paradigm, and simple feedforward population firing-rate models combined with linear or mixed linear-parabolic activation function are found to provide excellent fits to the data. The identified thalamocortical and intracortical network models are thus found to be qualitatively very different. While the thalamocortical circuit is optimally stimulated by rapid changes in the thalamic firing rate, the intracortical circuits are low-pass and respond most strongly to slowly varying inputs from the cortical layer-4 population. |
format | Text |
id | pubmed-2653726 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-26537262009-03-27 Estimation of Thalamocortical and Intracortical Network Models from Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the Rat Barrel System Blomquist, Patrick Devor, Anna Indahl, Ulf G. Ulbert, Istvan Einevoll, Gaute T. Dale, Anders M. PLoS Comput Biol Research Article A new method is presented for extraction of population firing-rate models for both thalamocortical and intracortical signal transfer based on stimulus-evoked data from simultaneous thalamic single-electrode and cortical recordings using linear (laminar) multielectrodes in the rat barrel system. Time-dependent population firing rates for granular (layer 4), supragranular (layer 2/3), and infragranular (layer 5) populations in a barrel column and the thalamic population in the homologous barreloid are extracted from the high-frequency portion (multi-unit activity; MUA) of the recorded extracellular signals. These extracted firing rates are in turn used to identify population firing-rate models formulated as integral equations with exponentially decaying coupling kernels, allowing for straightforward transformation to the more common firing-rate formulation in terms of differential equations. Optimal model structures and model parameters are identified by minimizing the deviation between model firing rates and the experimentally extracted population firing rates. For the thalamocortical transfer, the experimental data favor a model with fast feedforward excitation from thalamus to the layer-4 laminar population combined with a slower inhibitory process due to feedforward and/or recurrent connections and mixed linear-parabolic activation functions. The extracted firing rates of the various cortical laminar populations are found to exhibit strong temporal correlations for the present experimental paradigm, and simple feedforward population firing-rate models combined with linear or mixed linear-parabolic activation function are found to provide excellent fits to the data. The identified thalamocortical and intracortical network models are thus found to be qualitatively very different. While the thalamocortical circuit is optimally stimulated by rapid changes in the thalamic firing rate, the intracortical circuits are low-pass and respond most strongly to slowly varying inputs from the cortical layer-4 population. Public Library of Science 2009-03-27 /pmc/articles/PMC2653726/ /pubmed/19325875 http://dx.doi.org/10.1371/journal.pcbi.1000328 Text en Blomquist et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Blomquist, Patrick Devor, Anna Indahl, Ulf G. Ulbert, Istvan Einevoll, Gaute T. Dale, Anders M. Estimation of Thalamocortical and Intracortical Network Models from Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the Rat Barrel System |
title | Estimation of Thalamocortical and Intracortical Network Models from
Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the
Rat Barrel System |
title_full | Estimation of Thalamocortical and Intracortical Network Models from
Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the
Rat Barrel System |
title_fullStr | Estimation of Thalamocortical and Intracortical Network Models from
Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the
Rat Barrel System |
title_full_unstemmed | Estimation of Thalamocortical and Intracortical Network Models from
Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the
Rat Barrel System |
title_short | Estimation of Thalamocortical and Intracortical Network Models from
Joint Thalamic Single-Electrode and Cortical Laminar-Electrode Recordings in the
Rat Barrel System |
title_sort | estimation of thalamocortical and intracortical network models from
joint thalamic single-electrode and cortical laminar-electrode recordings in the
rat barrel system |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2653726/ https://www.ncbi.nlm.nih.gov/pubmed/19325875 http://dx.doi.org/10.1371/journal.pcbi.1000328 |
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