Cargando…

Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups

BACKGROUND: A small region of about 70 kb on human chromosome 19q13.3 encompasses 4 genes of which 3, ERCC1, ERCC2, and PPP1R13L (aka RAI) are related to DNA repair and cell survival, and one, CD3EAP, aka ASE1, may be related to cell proliferation. The whole region seems related to the cellular resp...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schierup, Mikkel H, Mailund, Thomas, Li, Heng, Wang, Jun, Tjønneland, Anne, Vogel, Ulla, Bolund, Lars, Nexø, Bjørn A
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2009
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2654437/ https://www.ncbi.nlm.nih.gov/pubmed/19257887 http://dx.doi.org/10.1186/1471-2350-10-20

Ejemplares similares

Assembly and analysis of 100 full MHC haplotypes from the Danish population
por: Jensen, Jacob M., et al.
Publicado: (2017)

Fine-mapping markers of lung cancer susceptibility in a sub-region of chromosome 19q13.3 among Chinese
por: Yin, Jiaoyang, et al.
Publicado: (2016)

Strong Selective Sweeps on the X Chromosome in the Human-Chimpanzee Ancestor Explain Its Low Divergence
por: Dutheil, Julien Y., et al.
Publicado: (2015)

Whole genome association mapping by incompatibilities and local perfect phylogenies
por: Mailund, Thomas, et al.
Publicado: (2006)

Unraveling recombination rate evolution using ancestral recombination maps
por: Munch, Kasper, et al.
Publicado: (2014)

Identifying disease associated genes by network propagation
por: Qian, Yu, et al.
Publicado: (2014)

Genomic Relationships and Speciation Times of Human, Chimpanzee, and Gorilla Inferred from a Coalescent Hidden Markov Model
por: Hobolth, Asger, et al.
Publicado: (2007)

A fine-scale recombination map of the human–chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion
por: Munch, Kasper, et al.
Publicado: (2014)

Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model
por: Mailund, Thomas, et al.
Publicado: (2011)

SOAPindel: Efficient identification of indels from short paired reads
por: Li, Shengting, et al.
Publicado: (2013)

Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion
por: Skov, Laurits, et al.
Publicado: (2017)

Is Chromosome 15q13.3 Duplication Involving CHRNA7 Associated With Oral Clefts?
por: Xie, Yingjun
Publicado: (2015)

A fast algorithm for genome-wide haplotype pattern mining
por: Besenbacher, Søren, et al.
Publicado: (2009)

CoaSim: A flexible environment for simulating genetic data under coalescent models
por: Mailund, Thomas, et al.
Publicado: (2005)

Spitting for Science: Danish High School Students Commit to a Large-Scale Self-Reported Genetic Study
por: Athanasiadis, Georgios, et al.
Publicado: (2016)

A Copy Number Variant on Chromosome 20q13.3 Implicated in Thinness and Severe Obesity
por: Hasstedt, Sandra J., et al.
Publicado: (2015)

Septo-optic dysplasia associated with chromosome 15q13.3 duplication: a case report
por: Ham, Jeong A, et al.
Publicado: (2022)

Chromosome 4q;10q translocations; Comparison with different ethnic populations and FSHD patients
por: Matsumura, Tsuyoshi, et al.
Publicado: (2002)

Deletion 22q13.3 syndrome
por: Phelan, Mary C
Publicado: (2008)

Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability
por: Antonacci, Francesca, et al.
Publicado: (2014)

A haplotype of polymorphisms in ASE-1, RAI and ERCC1 and the effects of tobacco smoking and alcohol consumption on risk of colorectal cancer: a danish prospective case-cohort study
por: Hansen, Rikke D, et al.
Publicado: (2008)

Characterisation of the genomic architecture of human chromosome 17q and evaluation of different methods for haplotype block definition
por: Zeggini, Eleftheria, et al.
Publicado: (2005)

Who gets cancer?
por: Nexø, BA, et al.
Publicado: (2005)

Linkage disequilibrium mapping of a breast cancer susceptibility locus near RAI/PPP1R13L/iASPP
por: Nexø, Bjørn A, et al.
Publicado: (2008)

APOE alleles modulate associations of plasma metabolites with variants from multiple genes on chromosome 19q13.3
por: Nazarian, Alireza, et al.
Publicado: (2022)

Evidence for Faster X Chromosome Evolution in Spiders
por: Bechsgaard, Jesper, et al.
Publicado: (2019)

The psychiatric phenotype of 15q11.2-q13.3 duplications
por: Budisteanu, M., et al.
Publicado: (2021)

Chromosome-scale, haplotype-resolved assembly of human genomes
por: Garg, Shilpa, et al.
Publicado: (2020)

Genetic linkage and transmission disequilibrium of marker haplotypes at chromosome 1q41 in human systemic lupus erythematosus
por: Graham, Robert R, et al.
Publicado: (2001)

Extraordinary selection on the human X chromosome associated with archaic admixture
por: Skov, Laurits, et al.
Publicado: (2023)

Direct determination of molecular haplotypes by chromosome microdissection
por: Ma, Li, et al.
Publicado: (2010)

Computational methods for chromosome-scale haplotype reconstruction
por: Garg, Shilpa
Publicado: (2021)

Chromosome-Level Haplotype Assembly for Equus asinu
por: Miao, Xinyao, et al.
Publicado: (2022)

Heterozygous Deletion of Chromosome 15q13.3 in a Boy with Developmental Regression, Global Developmental Delay, Hypotonia, and Short Stature
por: Strauss, Allison M., et al.
Publicado: (2022)

Whole-Genome and Chromosome Evolution Associated with Host Adaptation and Speciation of the Wheat Pathogen Mycosphaerella graminicola
por: Stukenbrock, Eva H., et al.
Publicado: (2010)

Coexistence of t(2;14;11)(p16.1;q32;q23) and t(14;19)(q32;q13.3) chromosome translocations in a patient with chronic lymphocytic leukemia: A case report
por: Liu, Guangming, et al.
Publicado: (2017)

11q13.3q13.4 deletion plus 9q21.13q21.33 duplication in an affected girl arising from a familial four‐way balanced chromosomal translocation
por: Zhang, Qinxin, et al.
Publicado: (2023)

Novel t(1;2)(p36.1;q23) and t(7;19)(q32;q13.3) chromosomal translocations in ischemic fasciitis: expanding the spectrum of pseudosarcomatous lesions with clonal pathogenetic link
por: Sachak, Taha, et al.
Publicado: (2018)

Y-chromosomal STRs haplotypes in the Taiwanese Paiwan population
por: Wu, Fang-Chin, et al.
Publicado: (2010)

Direct chromosome-length haplotyping by single-cell sequencing
por: Porubský, David, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_c42iptf3tft6mnd63jp78eiu9r