Cargando…
RNA structure prediction from evolutionary patterns of nucleotide composition
Structural elements in RNA molecules have a distinct nucleotide composition, which changes gradually over evolutionary time. We discovered certain features of these compositional patterns that are shared between all RNA families. Based on this information, we developed a structure prediction method...
Autores principales: | Smit, S., Knight, R., Heringa, J. |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2655677/ https://www.ncbi.nlm.nih.gov/pubmed/19129237 http://dx.doi.org/10.1093/nar/gkn987 |
Ejemplares similares
-
Evolutionary rates vary among rRNA structural elements
por: Smit, S., et al.
Publicado: (2007) -
Optimization of RNA 3D structure prediction using evolutionary restraints of nucleotide–nucleotide interactions from direct coupling analysis
por: Wang, Jian, et al.
Publicado: (2017) -
Predictions and analyses of RNA nearest neighbor parameters for modified nucleotides
por: Hopfinger, Melissa C, et al.
Publicado: (2020) -
Characterization and prediction of the binding site in DNA-binding proteins: improvement of accuracy by combining residue composition, evolutionary conservation and structural parameters
por: Dey, Sucharita, et al.
Publicado: (2012) -
Characteristic chemical probing patterns of loop motifs improve prediction accuracy of RNA secondary structures
por: Cao, Jingyi, et al.
Publicado: (2021)