New tools and expanded data analysis capabilities at the protein structure prediction center

We outline the main tasks performed by the Protein Structure Prediction Center in support of the CASP7 experiment and provide a brief review of the major measures used in the automatic evaluation of predictions. We describe in more detail the software developed to facilitate analysis of modeling suc...

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Autores principales: Kryshtafovych, Andriy, Prlic, Andreas, Dmytriv, Zinoviy, Daniluk, Pawel, Milostan, Maciej, Eyrich, Volker, Hubbard, Tim, Fidelis, Krzysztof
Formato: Texto
Lenguaje:English
Publicado: Wiley Subscription Services, Inc., A Wiley Company 2007
Materias:
Evaluation Measures
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2656758/
https://www.ncbi.nlm.nih.gov/pubmed/17705273
http://dx.doi.org/10.1002/prot.21653
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author Kryshtafovych, Andriy
Prlic, Andreas
Dmytriv, Zinoviy
Daniluk, Pawel
Milostan, Maciej
Eyrich, Volker
Hubbard, Tim
Fidelis, Krzysztof
author_facet Kryshtafovych, Andriy
Prlic, Andreas
Dmytriv, Zinoviy
Daniluk, Pawel
Milostan, Maciej
Eyrich, Volker
Hubbard, Tim
Fidelis, Krzysztof
author_sort Kryshtafovych, Andriy
collection PubMed
description We outline the main tasks performed by the Protein Structure Prediction Center in support of the CASP7 experiment and provide a brief review of the major measures used in the automatic evaluation of predictions. We describe in more detail the software developed to facilitate analysis of modeling success over and beyond the available templates and the adopted Java-based tool enabling visualization of multiple structural superpositions between target and several models/templates. We also give an overview of the CASP infrastructure provided by the Center and discuss the organization of the results web pages available through http://predictioncenter.org
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spelling pubmed-26567582009-03-26 New tools and expanded data analysis capabilities at the protein structure prediction center Kryshtafovych, Andriy Prlic, Andreas Dmytriv, Zinoviy Daniluk, Pawel Milostan, Maciej Eyrich, Volker Hubbard, Tim Fidelis, Krzysztof Proteins Evaluation Measures We outline the main tasks performed by the Protein Structure Prediction Center in support of the CASP7 experiment and provide a brief review of the major measures used in the automatic evaluation of predictions. We describe in more detail the software developed to facilitate analysis of modeling success over and beyond the available templates and the adopted Java-based tool enabling visualization of multiple structural superpositions between target and several models/templates. We also give an overview of the CASP infrastructure provided by the Center and discuss the organization of the results web pages available through http://predictioncenter.org Wiley Subscription Services, Inc., A Wiley Company 2007 2007-08-17 /pmc/articles/PMC2656758/ /pubmed/17705273 http://dx.doi.org/10.1002/prot.21653 Text en Copyright © 2007 Wiley-Liss, Inc., A Wiley Company
spellingShingle Evaluation Measures
Kryshtafovych, Andriy
Prlic, Andreas
Dmytriv, Zinoviy
Daniluk, Pawel
Milostan, Maciej
Eyrich, Volker
Hubbard, Tim
Fidelis, Krzysztof
New tools and expanded data analysis capabilities at the protein structure prediction center
title New tools and expanded data analysis capabilities at the protein structure prediction center
title_full New tools and expanded data analysis capabilities at the protein structure prediction center
title_fullStr New tools and expanded data analysis capabilities at the protein structure prediction center
title_full_unstemmed New tools and expanded data analysis capabilities at the protein structure prediction center
title_short New tools and expanded data analysis capabilities at the protein structure prediction center
title_sort new tools and expanded data analysis capabilities at the protein structure prediction center
topic Evaluation Measures
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2656758/
https://www.ncbi.nlm.nih.gov/pubmed/17705273
http://dx.doi.org/10.1002/prot.21653
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