MySSP: Non-stationary evolutionary sequence simulation, including indels

MySSP is a new program for the simulation of DNA sequence evolution across a phylogenetic tree. Although many programs are available for sequence simulation, MySSP is unique in its inclusion of indels, flexibility in allowing for non-stationary patterns, and output of ancestral sequences. Some of th...

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Detalles Bibliográficos
Autor principal: Rosenberg, Michael S.
Formato: Texto
Lenguaje:English
Publicado: Libertas Academica 2007
Materias:
Application Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2658873/
https://www.ncbi.nlm.nih.gov/pubmed/19325855
Descripción
Sumario:MySSP is a new program for the simulation of DNA sequence evolution across a phylogenetic tree. Although many programs are available for sequence simulation, MySSP is unique in its inclusion of indels, flexibility in allowing for non-stationary patterns, and output of ancestral sequences. Some of these features can individually be found in existing programs, but have not all have been previously available in a single package.

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