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Cloning-free regulated monitoring of reporter and gene expression

BACKGROUND: The majority of the promoters, their regulatory elements, and their variations in the human genome remain unknown. Reporter gene technology for transcriptional activity is a widely used tool for the study of promoter structure, gene regulation, and signaling pathways. Construction of tra...

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Autores principales: al-Haj, Latifa, Al-Ahmadi, Wijdan, Al-Saif, Maher, Demirkaya, Omer, Khabar, Khalid SA
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2662838/
https://www.ncbi.nlm.nih.gov/pubmed/19267938
http://dx.doi.org/10.1186/1471-2199-10-20
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author al-Haj, Latifa
Al-Ahmadi, Wijdan
Al-Saif, Maher
Demirkaya, Omer
Khabar, Khalid SA
author_facet al-Haj, Latifa
Al-Ahmadi, Wijdan
Al-Saif, Maher
Demirkaya, Omer
Khabar, Khalid SA
author_sort al-Haj, Latifa
collection PubMed
description BACKGROUND: The majority of the promoters, their regulatory elements, and their variations in the human genome remain unknown. Reporter gene technology for transcriptional activity is a widely used tool for the study of promoter structure, gene regulation, and signaling pathways. Construction of transcriptional reporter vectors, including use of cis-acting sequences, requires cloning and time-demanding manipulations, particularly with introduced mutations. RESULTS: In this report, we describe a cloning-free strategy to generate transcriptionally-controllable linear reporter constructs. This approach was applied in common transcriptional models of inflammatory response and the interferon system. In addition, it was used to delineate minimal transcriptional activity of selected ribosomal protein promoters. The approach was tested for conversion of genes into TetO-inducible/repressible expression cassettes. CONCLUSION: The simple introduction and tuning of any transcriptional control in the linear DNA product renders promoter activation and regulated gene studies simple and versatile.
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spelling pubmed-26628382009-03-31 Cloning-free regulated monitoring of reporter and gene expression al-Haj, Latifa Al-Ahmadi, Wijdan Al-Saif, Maher Demirkaya, Omer Khabar, Khalid SA BMC Mol Biol Methodology Article BACKGROUND: The majority of the promoters, their regulatory elements, and their variations in the human genome remain unknown. Reporter gene technology for transcriptional activity is a widely used tool for the study of promoter structure, gene regulation, and signaling pathways. Construction of transcriptional reporter vectors, including use of cis-acting sequences, requires cloning and time-demanding manipulations, particularly with introduced mutations. RESULTS: In this report, we describe a cloning-free strategy to generate transcriptionally-controllable linear reporter constructs. This approach was applied in common transcriptional models of inflammatory response and the interferon system. In addition, it was used to delineate minimal transcriptional activity of selected ribosomal protein promoters. The approach was tested for conversion of genes into TetO-inducible/repressible expression cassettes. CONCLUSION: The simple introduction and tuning of any transcriptional control in the linear DNA product renders promoter activation and regulated gene studies simple and versatile. BioMed Central 2009-03-08 /pmc/articles/PMC2662838/ /pubmed/19267938 http://dx.doi.org/10.1186/1471-2199-10-20 Text en Copyright © 2009 al-Haj et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methodology Article
al-Haj, Latifa
Al-Ahmadi, Wijdan
Al-Saif, Maher
Demirkaya, Omer
Khabar, Khalid SA
Cloning-free regulated monitoring of reporter and gene expression
title Cloning-free regulated monitoring of reporter and gene expression
title_full Cloning-free regulated monitoring of reporter and gene expression
title_fullStr Cloning-free regulated monitoring of reporter and gene expression
title_full_unstemmed Cloning-free regulated monitoring of reporter and gene expression
title_short Cloning-free regulated monitoring of reporter and gene expression
title_sort cloning-free regulated monitoring of reporter and gene expression
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2662838/
https://www.ncbi.nlm.nih.gov/pubmed/19267938
http://dx.doi.org/10.1186/1471-2199-10-20
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