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iMembrane: homology-based membrane-insertion of proteins

Summary: iMembrane is a homology-based method, which predicts a membrane protein's position within a lipid bilayer. It projects the results of coarse-grained molecular dynamics simulations onto any membrane protein structure or sequence provided by the user. iMembrane is simple to use and is cu...

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Detalles Bibliográficos
Autores principales: Kelm, Sebastian, Shi, Jiye, Deane, Charlotte M.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2666813/
https://www.ncbi.nlm.nih.gov/pubmed/19237449
http://dx.doi.org/10.1093/bioinformatics/btp102
Descripción
Sumario:Summary: iMembrane is a homology-based method, which predicts a membrane protein's position within a lipid bilayer. It projects the results of coarse-grained molecular dynamics simulations onto any membrane protein structure or sequence provided by the user. iMembrane is simple to use and is currently the only computational method allowing the rapid prediction of a membrane protein's lipid bilayer insertion. Bilayer insertion data are essential in the accurate structural modelling of membrane proteins or the design of drugs that target them. Availability: http://imembrane.info. iMembrane is available under a non-commercial open-source licence, upon request. Contact: kelm@stats.ox.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online and at http://www.stats.ox.ac.uk/proteins/resources.