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Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the m...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2667257/ https://www.ncbi.nlm.nih.gov/pubmed/19390605 http://dx.doi.org/10.1371/journal.pcbi.1000359 |
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author | Maruvka, Yosef E. Shnerb, Nadav M. |
author_facet | Maruvka, Yosef E. Shnerb, Nadav M. |
author_sort | Maruvka, Yosef E. |
collection | PubMed |
description | What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the main factor determining community structure. Both explanations suggest quite similar species-abundance distributions, but very different histories: niche scenarios assume that a species population in the past was similar to the observed one, while neutral scenarios are characterized by strongly fluctuating populations. Since the genetic variations within a population depend on its abundance in the past, we present here a way to discriminate between the theories using the genetic diversity of noncoding DNA. A statistical test, based on the Fu-Li method, has been developed and enables such a differentiation. We have analyzed the results gathered from individual-based simulation of both types of histories and obtained clear distinction between the Fu-Li statistics of the neutral scenario and that of the niche scenario. Our results suggest that data for 10–50 species, with approximately 30 sequenced individuals for each species, may allow one to distinguish between these two theories. |
format | Text |
id | pubmed-2667257 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-26672572009-04-24 Polymorphism Data Can Reveal the Origin of Species Abundance Statistics Maruvka, Yosef E. Shnerb, Nadav M. PLoS Comput Biol Research Article What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the main factor determining community structure. Both explanations suggest quite similar species-abundance distributions, but very different histories: niche scenarios assume that a species population in the past was similar to the observed one, while neutral scenarios are characterized by strongly fluctuating populations. Since the genetic variations within a population depend on its abundance in the past, we present here a way to discriminate between the theories using the genetic diversity of noncoding DNA. A statistical test, based on the Fu-Li method, has been developed and enables such a differentiation. We have analyzed the results gathered from individual-based simulation of both types of histories and obtained clear distinction between the Fu-Li statistics of the neutral scenario and that of the niche scenario. Our results suggest that data for 10–50 species, with approximately 30 sequenced individuals for each species, may allow one to distinguish between these two theories. Public Library of Science 2009-04-24 /pmc/articles/PMC2667257/ /pubmed/19390605 http://dx.doi.org/10.1371/journal.pcbi.1000359 Text en Maruvka, Shnerb. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Maruvka, Yosef E. Shnerb, Nadav M. Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title | Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title_full | Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title_fullStr | Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title_full_unstemmed | Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title_short | Polymorphism Data Can Reveal the Origin of Species Abundance Statistics |
title_sort | polymorphism data can reveal the origin of species abundance statistics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2667257/ https://www.ncbi.nlm.nih.gov/pubmed/19390605 http://dx.doi.org/10.1371/journal.pcbi.1000359 |
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