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Polymorphism Data Can Reveal the Origin of Species Abundance Statistics

What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the m...

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Detalles Bibliográficos
Autores principales: Maruvka, Yosef E., Shnerb, Nadav M.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2667257/
https://www.ncbi.nlm.nih.gov/pubmed/19390605
http://dx.doi.org/10.1371/journal.pcbi.1000359
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author Maruvka, Yosef E.
Shnerb, Nadav M.
author_facet Maruvka, Yosef E.
Shnerb, Nadav M.
author_sort Maruvka, Yosef E.
collection PubMed
description What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the main factor determining community structure. Both explanations suggest quite similar species-abundance distributions, but very different histories: niche scenarios assume that a species population in the past was similar to the observed one, while neutral scenarios are characterized by strongly fluctuating populations. Since the genetic variations within a population depend on its abundance in the past, we present here a way to discriminate between the theories using the genetic diversity of noncoding DNA. A statistical test, based on the Fu-Li method, has been developed and enables such a differentiation. We have analyzed the results gathered from individual-based simulation of both types of histories and obtained clear distinction between the Fu-Li statistics of the neutral scenario and that of the niche scenario. Our results suggest that data for 10–50 species, with approximately 30 sequenced individuals for each species, may allow one to distinguish between these two theories.
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spelling pubmed-26672572009-04-24 Polymorphism Data Can Reveal the Origin of Species Abundance Statistics Maruvka, Yosef E. Shnerb, Nadav M. PLoS Comput Biol Research Article What is the underlying mechanism behind the fat-tailed statistics observed for species abundance distributions? The two main hypotheses in the field are the adaptive (niche) theories, where species abundance reflects its fitness, and the neutral theory that assumes demographic stochasticity as the main factor determining community structure. Both explanations suggest quite similar species-abundance distributions, but very different histories: niche scenarios assume that a species population in the past was similar to the observed one, while neutral scenarios are characterized by strongly fluctuating populations. Since the genetic variations within a population depend on its abundance in the past, we present here a way to discriminate between the theories using the genetic diversity of noncoding DNA. A statistical test, based on the Fu-Li method, has been developed and enables such a differentiation. We have analyzed the results gathered from individual-based simulation of both types of histories and obtained clear distinction between the Fu-Li statistics of the neutral scenario and that of the niche scenario. Our results suggest that data for 10–50 species, with approximately 30 sequenced individuals for each species, may allow one to distinguish between these two theories. Public Library of Science 2009-04-24 /pmc/articles/PMC2667257/ /pubmed/19390605 http://dx.doi.org/10.1371/journal.pcbi.1000359 Text en Maruvka, Shnerb. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Maruvka, Yosef E.
Shnerb, Nadav M.
Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title_full Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title_fullStr Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title_full_unstemmed Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title_short Polymorphism Data Can Reveal the Origin of Species Abundance Statistics
title_sort polymorphism data can reveal the origin of species abundance statistics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2667257/
https://www.ncbi.nlm.nih.gov/pubmed/19390605
http://dx.doi.org/10.1371/journal.pcbi.1000359
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