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A microfluidic device to acquire high-magnification microphotographs of yeast cells
BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitativel...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669073/ https://www.ncbi.nlm.nih.gov/pubmed/19317904 http://dx.doi.org/10.1186/1747-1028-4-5 |
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author | Ohnuki, Shinsuke Nogami, Satoru Ohya, Yoshikazu |
author_facet | Ohnuki, Shinsuke Nogami, Satoru Ohya, Yoshikazu |
author_sort | Ohnuki, Shinsuke |
collection | PubMed |
description | BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitatively analyze yeast cell morphology with the 501 parameters as biological traits and uncover statistical relationships between cell morphological phenotypes and genotypes. However, the current semi-automatic method is not suitable for morphological analysis of large-scale yeast mutants for the reliable prediction of gene functions because of its low-throughput especially at the manual image-acquiring process. RESULTS: In this study, we developed a microfluidic chip designed to acquire successive microscopic images of yeast cells suitable for CalMorph image analysis. With the microfluidic chip, the morphology of living cells and morphological changes that occur during the cell cycle were successfully characterized. CONCLUSION: The microfluidic chip enabled us to acquire the images faster than the conventional method. We speculate that the use of microfluidic chip is effective in acquiring images of large-scale for automated analysis of yeast strains. |
format | Text |
id | pubmed-2669073 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-26690732009-04-15 A microfluidic device to acquire high-magnification microphotographs of yeast cells Ohnuki, Shinsuke Nogami, Satoru Ohya, Yoshikazu Cell Div Methodology BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitatively analyze yeast cell morphology with the 501 parameters as biological traits and uncover statistical relationships between cell morphological phenotypes and genotypes. However, the current semi-automatic method is not suitable for morphological analysis of large-scale yeast mutants for the reliable prediction of gene functions because of its low-throughput especially at the manual image-acquiring process. RESULTS: In this study, we developed a microfluidic chip designed to acquire successive microscopic images of yeast cells suitable for CalMorph image analysis. With the microfluidic chip, the morphology of living cells and morphological changes that occur during the cell cycle were successfully characterized. CONCLUSION: The microfluidic chip enabled us to acquire the images faster than the conventional method. We speculate that the use of microfluidic chip is effective in acquiring images of large-scale for automated analysis of yeast strains. BioMed Central 2009-03-24 /pmc/articles/PMC2669073/ /pubmed/19317904 http://dx.doi.org/10.1186/1747-1028-4-5 Text en Copyright © 2009 Ohnuki et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methodology Ohnuki, Shinsuke Nogami, Satoru Ohya, Yoshikazu A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title | A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title_full | A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title_fullStr | A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title_full_unstemmed | A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title_short | A microfluidic device to acquire high-magnification microphotographs of yeast cells |
title_sort | microfluidic device to acquire high-magnification microphotographs of yeast cells |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669073/ https://www.ncbi.nlm.nih.gov/pubmed/19317904 http://dx.doi.org/10.1186/1747-1028-4-5 |
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