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A microfluidic device to acquire high-magnification microphotographs of yeast cells

BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitativel...

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Detalles Bibliográficos
Autores principales: Ohnuki, Shinsuke, Nogami, Satoru, Ohya, Yoshikazu
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669073/
https://www.ncbi.nlm.nih.gov/pubmed/19317904
http://dx.doi.org/10.1186/1747-1028-4-5
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author Ohnuki, Shinsuke
Nogami, Satoru
Ohya, Yoshikazu
author_facet Ohnuki, Shinsuke
Nogami, Satoru
Ohya, Yoshikazu
author_sort Ohnuki, Shinsuke
collection PubMed
description BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitatively analyze yeast cell morphology with the 501 parameters as biological traits and uncover statistical relationships between cell morphological phenotypes and genotypes. However, the current semi-automatic method is not suitable for morphological analysis of large-scale yeast mutants for the reliable prediction of gene functions because of its low-throughput especially at the manual image-acquiring process. RESULTS: In this study, we developed a microfluidic chip designed to acquire successive microscopic images of yeast cells suitable for CalMorph image analysis. With the microfluidic chip, the morphology of living cells and morphological changes that occur during the cell cycle were successfully characterized. CONCLUSION: The microfluidic chip enabled us to acquire the images faster than the conventional method. We speculate that the use of microfluidic chip is effective in acquiring images of large-scale for automated analysis of yeast strains.
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spelling pubmed-26690732009-04-15 A microfluidic device to acquire high-magnification microphotographs of yeast cells Ohnuki, Shinsuke Nogami, Satoru Ohya, Yoshikazu Cell Div Methodology BACKGROUND: Yeast cell morphology was investigated to reveal the molecular mechanisms of cell morphogenesis and to identify key factors of other processes such as cell cycle progression. We recently developed a semi-automatic image processing program called CalMorph, which allows us to quantitatively analyze yeast cell morphology with the 501 parameters as biological traits and uncover statistical relationships between cell morphological phenotypes and genotypes. However, the current semi-automatic method is not suitable for morphological analysis of large-scale yeast mutants for the reliable prediction of gene functions because of its low-throughput especially at the manual image-acquiring process. RESULTS: In this study, we developed a microfluidic chip designed to acquire successive microscopic images of yeast cells suitable for CalMorph image analysis. With the microfluidic chip, the morphology of living cells and morphological changes that occur during the cell cycle were successfully characterized. CONCLUSION: The microfluidic chip enabled us to acquire the images faster than the conventional method. We speculate that the use of microfluidic chip is effective in acquiring images of large-scale for automated analysis of yeast strains. BioMed Central 2009-03-24 /pmc/articles/PMC2669073/ /pubmed/19317904 http://dx.doi.org/10.1186/1747-1028-4-5 Text en Copyright © 2009 Ohnuki et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methodology
Ohnuki, Shinsuke
Nogami, Satoru
Ohya, Yoshikazu
A microfluidic device to acquire high-magnification microphotographs of yeast cells
title A microfluidic device to acquire high-magnification microphotographs of yeast cells
title_full A microfluidic device to acquire high-magnification microphotographs of yeast cells
title_fullStr A microfluidic device to acquire high-magnification microphotographs of yeast cells
title_full_unstemmed A microfluidic device to acquire high-magnification microphotographs of yeast cells
title_short A microfluidic device to acquire high-magnification microphotographs of yeast cells
title_sort microfluidic device to acquire high-magnification microphotographs of yeast cells
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669073/
https://www.ncbi.nlm.nih.gov/pubmed/19317904
http://dx.doi.org/10.1186/1747-1028-4-5
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