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Enhancing Time-Series Detection Algorithms for Automated Biosurveillance

BioSense is a US national system that uses data from health information systems for automated disease surveillance. We studied 4 time-series algorithm modifications designed to improve sensitivity for detecting artificially added data. To test these modified algorithms, we used reports of daily synd...

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Detalles Bibliográficos
Autores principales: Tokars, Jerome I., Burkom, Howard, Xing, Jian, English, Roseanne, Bloom, Steven, Cox, Kenneth, Pavlin, Julie A.
Formato: Texto
Lenguaje:English
Publicado: Centers for Disease Control and Prevention 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2671446/
https://www.ncbi.nlm.nih.gov/pubmed/19331728
http://dx.doi.org/10.3201/1504.080616
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author Tokars, Jerome I.
Burkom, Howard
Xing, Jian
English, Roseanne
Bloom, Steven
Cox, Kenneth
Pavlin, Julie A.
author_facet Tokars, Jerome I.
Burkom, Howard
Xing, Jian
English, Roseanne
Bloom, Steven
Cox, Kenneth
Pavlin, Julie A.
author_sort Tokars, Jerome I.
collection PubMed
description BioSense is a US national system that uses data from health information systems for automated disease surveillance. We studied 4 time-series algorithm modifications designed to improve sensitivity for detecting artificially added data. To test these modified algorithms, we used reports of daily syndrome visits from 308 Department of Defense (DoD) facilities and 340 hospital emergency departments (EDs). At a constant alert rate of 1%, sensitivity was improved for both datasets by using a minimum standard deviation (SD) of 1.0, a 14–28 day baseline duration for calculating mean and SD, and an adjustment for total clinic visits as a surrogate denominator. Stratifying baseline days into weekdays versus weekends to account for day-of-week effects increased sensitivity for the DoD data but not for the ED data. These enhanced methods may increase sensitivity without increasing the alert rate and may improve the ability to detect outbreaks by using automated surveillance system data.
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spelling pubmed-26714462009-05-21 Enhancing Time-Series Detection Algorithms for Automated Biosurveillance Tokars, Jerome I. Burkom, Howard Xing, Jian English, Roseanne Bloom, Steven Cox, Kenneth Pavlin, Julie A. Emerg Infect Dis Research BioSense is a US national system that uses data from health information systems for automated disease surveillance. We studied 4 time-series algorithm modifications designed to improve sensitivity for detecting artificially added data. To test these modified algorithms, we used reports of daily syndrome visits from 308 Department of Defense (DoD) facilities and 340 hospital emergency departments (EDs). At a constant alert rate of 1%, sensitivity was improved for both datasets by using a minimum standard deviation (SD) of 1.0, a 14–28 day baseline duration for calculating mean and SD, and an adjustment for total clinic visits as a surrogate denominator. Stratifying baseline days into weekdays versus weekends to account for day-of-week effects increased sensitivity for the DoD data but not for the ED data. These enhanced methods may increase sensitivity without increasing the alert rate and may improve the ability to detect outbreaks by using automated surveillance system data. Centers for Disease Control and Prevention 2009-04 /pmc/articles/PMC2671446/ /pubmed/19331728 http://dx.doi.org/10.3201/1504.080616 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited.
spellingShingle Research
Tokars, Jerome I.
Burkom, Howard
Xing, Jian
English, Roseanne
Bloom, Steven
Cox, Kenneth
Pavlin, Julie A.
Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title_full Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title_fullStr Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title_full_unstemmed Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title_short Enhancing Time-Series Detection Algorithms for Automated Biosurveillance
title_sort enhancing time-series detection algorithms for automated biosurveillance
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2671446/
https://www.ncbi.nlm.nih.gov/pubmed/19331728
http://dx.doi.org/10.3201/1504.080616
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