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Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules
X-ray and neutron crystallographic techniques provide complementary information on the structure and function of biological macromolecules. X-ray and neutron (XN) crystallographic data have been combined in a joint structure-refinement procedure that has been developed using recent advances in mode...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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International Union of Crystallography
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685734/ https://www.ncbi.nlm.nih.gov/pubmed/19465771 http://dx.doi.org/10.1107/S0907444909011548 |
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author | Adams, Paul D. Mustyakimov, Marat Afonine, Pavel V. Langan, Paul |
author_facet | Adams, Paul D. Mustyakimov, Marat Afonine, Pavel V. Langan, Paul |
author_sort | Adams, Paul D. |
collection | PubMed |
description | X-ray and neutron crystallographic techniques provide complementary information on the structure and function of biological macromolecules. X-ray and neutron (XN) crystallographic data have been combined in a joint structure-refinement procedure that has been developed using recent advances in modern computational methodologies, including cross-validated maximum-likelihood target functions with gradient-based optimization and simulated annealing. The XN approach for complete (including hydrogen) macromolecular structure analysis provides more accurate and complete structures, as demonstrated for diisopropyl fluorophosphatase, photoactive yellow protein and human aldose reductase. Furthermore, this method has several practical advantages, including the easier determination of the orientation of water molecules, hydroxyl groups and some amino-acid side chains. |
format | Text |
id | pubmed-2685734 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-26857342010-01-19 Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules Adams, Paul D. Mustyakimov, Marat Afonine, Pavel V. Langan, Paul Acta Crystallogr D Biol Crystallogr Research Papers X-ray and neutron crystallographic techniques provide complementary information on the structure and function of biological macromolecules. X-ray and neutron (XN) crystallographic data have been combined in a joint structure-refinement procedure that has been developed using recent advances in modern computational methodologies, including cross-validated maximum-likelihood target functions with gradient-based optimization and simulated annealing. The XN approach for complete (including hydrogen) macromolecular structure analysis provides more accurate and complete structures, as demonstrated for diisopropyl fluorophosphatase, photoactive yellow protein and human aldose reductase. Furthermore, this method has several practical advantages, including the easier determination of the orientation of water molecules, hydroxyl groups and some amino-acid side chains. International Union of Crystallography 2009-05-15 /pmc/articles/PMC2685734/ /pubmed/19465771 http://dx.doi.org/10.1107/S0907444909011548 Text en © Adams et al. 2009 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Adams, Paul D. Mustyakimov, Marat Afonine, Pavel V. Langan, Paul Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title | Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title_full | Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title_fullStr | Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title_full_unstemmed | Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title_short | Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
title_sort | generalized x-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685734/ https://www.ncbi.nlm.nih.gov/pubmed/19465771 http://dx.doi.org/10.1107/S0907444909011548 |
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