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The Toxicity Data Landscape for Environmental Chemicals
OBJECTIVE: Thousands of chemicals are in common use, but only a portion of them have undergone significant toxicologic evaluation, leading to the need to prioritize the remainder for targeted testing. To address this issue, the U.S. Environmental Protection Agency (EPA) and other organizations are d...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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National Institute of Environmental Health Sciences
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685828/ https://www.ncbi.nlm.nih.gov/pubmed/19479008 http://dx.doi.org/10.1289/ehp.0800168 |
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author | Judson, Richard Richard, Ann Dix, David J. Houck, Keith Martin, Matthew Kavlock, Robert Dellarco, Vicki Henry, Tala Holderman, Todd Sayre, Philip Tan, Shirlee Carpenter, Thomas Smith, Edwin |
author_facet | Judson, Richard Richard, Ann Dix, David J. Houck, Keith Martin, Matthew Kavlock, Robert Dellarco, Vicki Henry, Tala Holderman, Todd Sayre, Philip Tan, Shirlee Carpenter, Thomas Smith, Edwin |
author_sort | Judson, Richard |
collection | PubMed |
description | OBJECTIVE: Thousands of chemicals are in common use, but only a portion of them have undergone significant toxicologic evaluation, leading to the need to prioritize the remainder for targeted testing. To address this issue, the U.S. Environmental Protection Agency (EPA) and other organizations are developing chemical screening and prioritization programs. As part of these efforts, it is important to catalog, from widely dispersed sources, the toxicology information that is available. The main objective of this analysis is to define a list of environmental chemicals that are candidates for the U.S. EPA screening and prioritization process, and to catalog the available toxicology information. DATA SOURCES: We are developing ACToR (Aggregated Computational Toxicology Resource), which combines information for hundreds of thousands of chemicals from > 200 public sources, including the U.S. EPA, National Institutes of Health, Food and Drug Administration, corresponding agencies in Canada, Europe, and Japan, and academic sources. DATA EXTRACTION: ACToR contains chemical structure information; physical–chemical properties; in vitro assay data; tabular in vivo data; summary toxicology calls (e.g., a statement that a chemical is considered to be a human carcinogen); and links to online toxicology summaries. Here, we use data from ACToR to assess the toxicity data landscape for environmental chemicals. DATA SYNTHESIS: We show results for a set of 9,912 environmental chemicals being considered for analysis as part of the U.S. EPA ToxCast screening and prioritization program. These include high-and medium-production-volume chemicals, pesticide active and inert ingredients, and drinking water contaminants. CONCLUSIONS: Approximately two-thirds of these chemicals have at least limited toxicity summaries available. About one-quarter have been assessed in at least one highly curated toxicology evaluation database such as the U.S. EPA Toxicology Reference Database, U.S. EPA Integrated Risk Information System, and the National Toxicology Program. |
format | Text |
id | pubmed-2685828 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | National Institute of Environmental Health Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-26858282009-05-27 The Toxicity Data Landscape for Environmental Chemicals Judson, Richard Richard, Ann Dix, David J. Houck, Keith Martin, Matthew Kavlock, Robert Dellarco, Vicki Henry, Tala Holderman, Todd Sayre, Philip Tan, Shirlee Carpenter, Thomas Smith, Edwin Environ Health Perspect Review OBJECTIVE: Thousands of chemicals are in common use, but only a portion of them have undergone significant toxicologic evaluation, leading to the need to prioritize the remainder for targeted testing. To address this issue, the U.S. Environmental Protection Agency (EPA) and other organizations are developing chemical screening and prioritization programs. As part of these efforts, it is important to catalog, from widely dispersed sources, the toxicology information that is available. The main objective of this analysis is to define a list of environmental chemicals that are candidates for the U.S. EPA screening and prioritization process, and to catalog the available toxicology information. DATA SOURCES: We are developing ACToR (Aggregated Computational Toxicology Resource), which combines information for hundreds of thousands of chemicals from > 200 public sources, including the U.S. EPA, National Institutes of Health, Food and Drug Administration, corresponding agencies in Canada, Europe, and Japan, and academic sources. DATA EXTRACTION: ACToR contains chemical structure information; physical–chemical properties; in vitro assay data; tabular in vivo data; summary toxicology calls (e.g., a statement that a chemical is considered to be a human carcinogen); and links to online toxicology summaries. Here, we use data from ACToR to assess the toxicity data landscape for environmental chemicals. DATA SYNTHESIS: We show results for a set of 9,912 environmental chemicals being considered for analysis as part of the U.S. EPA ToxCast screening and prioritization program. These include high-and medium-production-volume chemicals, pesticide active and inert ingredients, and drinking water contaminants. CONCLUSIONS: Approximately two-thirds of these chemicals have at least limited toxicity summaries available. About one-quarter have been assessed in at least one highly curated toxicology evaluation database such as the U.S. EPA Toxicology Reference Database, U.S. EPA Integrated Risk Information System, and the National Toxicology Program. National Institute of Environmental Health Sciences 2009-05 2008-12-22 /pmc/articles/PMC2685828/ /pubmed/19479008 http://dx.doi.org/10.1289/ehp.0800168 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, ?Reproduced with permission from Environmental Health Perspectives?); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright. |
spellingShingle | Review Judson, Richard Richard, Ann Dix, David J. Houck, Keith Martin, Matthew Kavlock, Robert Dellarco, Vicki Henry, Tala Holderman, Todd Sayre, Philip Tan, Shirlee Carpenter, Thomas Smith, Edwin The Toxicity Data Landscape for Environmental Chemicals |
title | The Toxicity Data Landscape for Environmental Chemicals |
title_full | The Toxicity Data Landscape for Environmental Chemicals |
title_fullStr | The Toxicity Data Landscape for Environmental Chemicals |
title_full_unstemmed | The Toxicity Data Landscape for Environmental Chemicals |
title_short | The Toxicity Data Landscape for Environmental Chemicals |
title_sort | toxicity data landscape for environmental chemicals |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685828/ https://www.ncbi.nlm.nih.gov/pubmed/19479008 http://dx.doi.org/10.1289/ehp.0800168 |
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