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GenBank
GenBank(®) is a comprehensive database that contains publicly available nucleotide sequences for more than 300 000 organisms named at the genus level or lower, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submiss...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686462/ https://www.ncbi.nlm.nih.gov/pubmed/18940867 http://dx.doi.org/10.1093/nar/gkn723 |
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author | Benson, Dennis A. Karsch-Mizrachi, Ilene Lipman, David J. Ostell, James Sayers, Eric W. |
author_facet | Benson, Dennis A. Karsch-Mizrachi, Ilene Lipman, David J. Ostell, James Sayers, Eric W. |
author_sort | Benson, Dennis A. |
collection | PubMed |
description | GenBank(®) is a comprehensive database that contains publicly available nucleotide sequences for more than 300 000 organisms named at the genus level or lower, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submissions are made using the web-based BankIt or standalone Sequin programs, and accession numbers are assigned by GenBank® staff upon receipt. Daily data exchange with the European Molecular Biology Laboratory Nucleotide Sequence Database in Europe and the DNA Data Bank of Japan ensures worldwide coverage. GenBank is accessible through the National Center for Biotechnology Information (NCBI) Entrez retrieval system, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, begin at the NCBI Homepage: www.ncbi.nlm.nih.gov. |
format | Text |
id | pubmed-2686462 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-26864622009-05-26 GenBank Benson, Dennis A. Karsch-Mizrachi, Ilene Lipman, David J. Ostell, James Sayers, Eric W. Nucleic Acids Res Articles GenBank(®) is a comprehensive database that contains publicly available nucleotide sequences for more than 300 000 organisms named at the genus level or lower, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submissions are made using the web-based BankIt or standalone Sequin programs, and accession numbers are assigned by GenBank® staff upon receipt. Daily data exchange with the European Molecular Biology Laboratory Nucleotide Sequence Database in Europe and the DNA Data Bank of Japan ensures worldwide coverage. GenBank is accessible through the National Center for Biotechnology Information (NCBI) Entrez retrieval system, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, begin at the NCBI Homepage: www.ncbi.nlm.nih.gov. Oxford University Press 2009-01 2008-10-21 /pmc/articles/PMC2686462/ /pubmed/18940867 http://dx.doi.org/10.1093/nar/gkn723 Text en © Published by Oxford University Press (2008) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Benson, Dennis A. Karsch-Mizrachi, Ilene Lipman, David J. Ostell, James Sayers, Eric W. GenBank |
title | GenBank |
title_full | GenBank |
title_fullStr | GenBank |
title_full_unstemmed | GenBank |
title_short | GenBank |
title_sort | genbank |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686462/ https://www.ncbi.nlm.nih.gov/pubmed/18940867 http://dx.doi.org/10.1093/nar/gkn723 |
work_keys_str_mv | AT bensondennisa genbank AT karschmizrachiilene genbank AT lipmandavidj genbank AT ostelljames genbank AT sayersericw genbank |