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dictyBase—a Dictyostelium bioinformatics resource update

dictyBase (http://dictybase.org) is the model organism database for Dictyostelium discoideum. It houses the complete genome sequence, ESTs and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goa...

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Autores principales: Fey, Petra, Gaudet, Pascale, Curk, Tomaz, Zupan, Blaz, Just, Eric M., Basu, Siddhartha, Merchant, Sohel N., Bushmanova, Yulia A., Shaulsky, Gad, Kibbe, Warren A., Chisholm, Rex L.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686522/
https://www.ncbi.nlm.nih.gov/pubmed/18974179
http://dx.doi.org/10.1093/nar/gkn844
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author Fey, Petra
Gaudet, Pascale
Curk, Tomaz
Zupan, Blaz
Just, Eric M.
Basu, Siddhartha
Merchant, Sohel N.
Bushmanova, Yulia A.
Shaulsky, Gad
Kibbe, Warren A.
Chisholm, Rex L.
author_facet Fey, Petra
Gaudet, Pascale
Curk, Tomaz
Zupan, Blaz
Just, Eric M.
Basu, Siddhartha
Merchant, Sohel N.
Bushmanova, Yulia A.
Shaulsky, Gad
Kibbe, Warren A.
Chisholm, Rex L.
author_sort Fey, Petra
collection PubMed
description dictyBase (http://dictybase.org) is the model organism database for Dictyostelium discoideum. It houses the complete genome sequence, ESTs and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome. This dictyBase update describes the annotations and features implemented since 2006, including improved strain and phenotype representation, integration of predicted transcriptional regulatory elements, protein domain information, biochemical pathways, improved searching and a wiki tool that allows members of the research community to provide annotations.
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spelling pubmed-26865222009-06-15 dictyBase—a Dictyostelium bioinformatics resource update Fey, Petra Gaudet, Pascale Curk, Tomaz Zupan, Blaz Just, Eric M. Basu, Siddhartha Merchant, Sohel N. Bushmanova, Yulia A. Shaulsky, Gad Kibbe, Warren A. Chisholm, Rex L. Nucleic Acids Res Articles dictyBase (http://dictybase.org) is the model organism database for Dictyostelium discoideum. It houses the complete genome sequence, ESTs and the entire body of literature relevant to Dictyostelium. This information is curated to provide accurate gene models and functional annotations, with the goal of fully annotating the genome. This dictyBase update describes the annotations and features implemented since 2006, including improved strain and phenotype representation, integration of predicted transcriptional regulatory elements, protein domain information, biochemical pathways, improved searching and a wiki tool that allows members of the research community to provide annotations. Oxford University Press 2009-01 2008-10-30 /pmc/articles/PMC2686522/ /pubmed/18974179 http://dx.doi.org/10.1093/nar/gkn844 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Fey, Petra
Gaudet, Pascale
Curk, Tomaz
Zupan, Blaz
Just, Eric M.
Basu, Siddhartha
Merchant, Sohel N.
Bushmanova, Yulia A.
Shaulsky, Gad
Kibbe, Warren A.
Chisholm, Rex L.
dictyBase—a Dictyostelium bioinformatics resource update
title dictyBase—a Dictyostelium bioinformatics resource update
title_full dictyBase—a Dictyostelium bioinformatics resource update
title_fullStr dictyBase—a Dictyostelium bioinformatics resource update
title_full_unstemmed dictyBase—a Dictyostelium bioinformatics resource update
title_short dictyBase—a Dictyostelium bioinformatics resource update
title_sort dictybase—a dictyostelium bioinformatics resource update
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686522/
https://www.ncbi.nlm.nih.gov/pubmed/18974179
http://dx.doi.org/10.1093/nar/gkn844
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