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The YH database: the first Asian diploid genome database

The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse,...

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Detalles Bibliográficos
Autores principales: Li, Guoqing, Ma, Lijia, Song, Chao, Yang, Zhentao, Wang, Xiulan, Huang, Hui, Li, Yingrui, Li, Ruiqiang, Zhang, Xiuqing, Yang, Huanming, Wang, Jian, Wang, Jun
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686535/
https://www.ncbi.nlm.nih.gov/pubmed/19073702
http://dx.doi.org/10.1093/nar/gkn966
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author Li, Guoqing
Ma, Lijia
Song, Chao
Yang, Zhentao
Wang, Xiulan
Huang, Hui
Li, Yingrui
Li, Ruiqiang
Zhang, Xiuqing
Yang, Huanming
Wang, Jian
Wang, Jun
author_facet Li, Guoqing
Ma, Lijia
Song, Chao
Yang, Zhentao
Wang, Xiulan
Huang, Hui
Li, Yingrui
Li, Ruiqiang
Zhang, Xiuqing
Yang, Huanming
Wang, Jian
Wang, Jun
author_sort Li, Guoqing
collection PubMed
description The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse, we illustrate here the genome sequences, SNPs, and sequencing reads in the MapView. The relationships between phenotype and genotype can be searched by location, dbSNP ID, HGMD ID, gene symbol and disease name. A BLAST web service is also provided for the purpose of aligning query sequence against YH genome consensus. The YH database is currently one of the three personal genome database, organizing the original data and analysis results in a user-friendly interface, which is an endeavor to achieve fundamental goals for establishing personal medicine. The database is available at http://yh.genomics.org.cn.
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spelling pubmed-26865352009-05-26 The YH database: the first Asian diploid genome database Li, Guoqing Ma, Lijia Song, Chao Yang, Zhentao Wang, Xiulan Huang, Hui Li, Yingrui Li, Ruiqiang Zhang, Xiuqing Yang, Huanming Wang, Jian Wang, Jun Nucleic Acids Res Articles The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse, we illustrate here the genome sequences, SNPs, and sequencing reads in the MapView. The relationships between phenotype and genotype can be searched by location, dbSNP ID, HGMD ID, gene symbol and disease name. A BLAST web service is also provided for the purpose of aligning query sequence against YH genome consensus. The YH database is currently one of the three personal genome database, organizing the original data and analysis results in a user-friendly interface, which is an endeavor to achieve fundamental goals for establishing personal medicine. The database is available at http://yh.genomics.org.cn. Oxford University Press 2009-01 2008-12-08 /pmc/articles/PMC2686535/ /pubmed/19073702 http://dx.doi.org/10.1093/nar/gkn966 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Li, Guoqing
Ma, Lijia
Song, Chao
Yang, Zhentao
Wang, Xiulan
Huang, Hui
Li, Yingrui
Li, Ruiqiang
Zhang, Xiuqing
Yang, Huanming
Wang, Jian
Wang, Jun
The YH database: the first Asian diploid genome database
title The YH database: the first Asian diploid genome database
title_full The YH database: the first Asian diploid genome database
title_fullStr The YH database: the first Asian diploid genome database
title_full_unstemmed The YH database: the first Asian diploid genome database
title_short The YH database: the first Asian diploid genome database
title_sort yh database: the first asian diploid genome database
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686535/
https://www.ncbi.nlm.nih.gov/pubmed/19073702
http://dx.doi.org/10.1093/nar/gkn966
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