Cargando…
The YH database: the first Asian diploid genome database
The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse,...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686535/ https://www.ncbi.nlm.nih.gov/pubmed/19073702 http://dx.doi.org/10.1093/nar/gkn966 |
_version_ | 1782167430233063424 |
---|---|
author | Li, Guoqing Ma, Lijia Song, Chao Yang, Zhentao Wang, Xiulan Huang, Hui Li, Yingrui Li, Ruiqiang Zhang, Xiuqing Yang, Huanming Wang, Jian Wang, Jun |
author_facet | Li, Guoqing Ma, Lijia Song, Chao Yang, Zhentao Wang, Xiulan Huang, Hui Li, Yingrui Li, Ruiqiang Zhang, Xiuqing Yang, Huanming Wang, Jian Wang, Jun |
author_sort | Li, Guoqing |
collection | PubMed |
description | The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse, we illustrate here the genome sequences, SNPs, and sequencing reads in the MapView. The relationships between phenotype and genotype can be searched by location, dbSNP ID, HGMD ID, gene symbol and disease name. A BLAST web service is also provided for the purpose of aligning query sequence against YH genome consensus. The YH database is currently one of the three personal genome database, organizing the original data and analysis results in a user-friendly interface, which is an endeavor to achieve fundamental goals for establishing personal medicine. The database is available at http://yh.genomics.org.cn. |
format | Text |
id | pubmed-2686535 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-26865352009-05-26 The YH database: the first Asian diploid genome database Li, Guoqing Ma, Lijia Song, Chao Yang, Zhentao Wang, Xiulan Huang, Hui Li, Yingrui Li, Ruiqiang Zhang, Xiuqing Yang, Huanming Wang, Jian Wang, Jun Nucleic Acids Res Articles The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse, we illustrate here the genome sequences, SNPs, and sequencing reads in the MapView. The relationships between phenotype and genotype can be searched by location, dbSNP ID, HGMD ID, gene symbol and disease name. A BLAST web service is also provided for the purpose of aligning query sequence against YH genome consensus. The YH database is currently one of the three personal genome database, organizing the original data and analysis results in a user-friendly interface, which is an endeavor to achieve fundamental goals for establishing personal medicine. The database is available at http://yh.genomics.org.cn. Oxford University Press 2009-01 2008-12-08 /pmc/articles/PMC2686535/ /pubmed/19073702 http://dx.doi.org/10.1093/nar/gkn966 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Li, Guoqing Ma, Lijia Song, Chao Yang, Zhentao Wang, Xiulan Huang, Hui Li, Yingrui Li, Ruiqiang Zhang, Xiuqing Yang, Huanming Wang, Jian Wang, Jun The YH database: the first Asian diploid genome database |
title | The YH database: the first Asian diploid genome database |
title_full | The YH database: the first Asian diploid genome database |
title_fullStr | The YH database: the first Asian diploid genome database |
title_full_unstemmed | The YH database: the first Asian diploid genome database |
title_short | The YH database: the first Asian diploid genome database |
title_sort | yh database: the first asian diploid genome database |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686535/ https://www.ncbi.nlm.nih.gov/pubmed/19073702 http://dx.doi.org/10.1093/nar/gkn966 |
work_keys_str_mv | AT liguoqing theyhdatabasethefirstasiandiploidgenomedatabase AT malijia theyhdatabasethefirstasiandiploidgenomedatabase AT songchao theyhdatabasethefirstasiandiploidgenomedatabase AT yangzhentao theyhdatabasethefirstasiandiploidgenomedatabase AT wangxiulan theyhdatabasethefirstasiandiploidgenomedatabase AT huanghui theyhdatabasethefirstasiandiploidgenomedatabase AT liyingrui theyhdatabasethefirstasiandiploidgenomedatabase AT liruiqiang theyhdatabasethefirstasiandiploidgenomedatabase AT zhangxiuqing theyhdatabasethefirstasiandiploidgenomedatabase AT yanghuanming theyhdatabasethefirstasiandiploidgenomedatabase AT wangjian theyhdatabasethefirstasiandiploidgenomedatabase AT wangjun theyhdatabasethefirstasiandiploidgenomedatabase AT liguoqing yhdatabasethefirstasiandiploidgenomedatabase AT malijia yhdatabasethefirstasiandiploidgenomedatabase AT songchao yhdatabasethefirstasiandiploidgenomedatabase AT yangzhentao yhdatabasethefirstasiandiploidgenomedatabase AT wangxiulan yhdatabasethefirstasiandiploidgenomedatabase AT huanghui yhdatabasethefirstasiandiploidgenomedatabase AT liyingrui yhdatabasethefirstasiandiploidgenomedatabase AT liruiqiang yhdatabasethefirstasiandiploidgenomedatabase AT zhangxiuqing yhdatabasethefirstasiandiploidgenomedatabase AT yanghuanming yhdatabasethefirstasiandiploidgenomedatabase AT wangjian yhdatabasethefirstasiandiploidgenomedatabase AT wangjun yhdatabasethefirstasiandiploidgenomedatabase |