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The IMGT/HLA database
It is 10 years since the IMGT/HLA database was released, providing the HLA community with a searchable repository of highly curated HLA sequences. The HLA complex is located within the 6p21.3 region of human chromosome 6 and contains more than 220 genes of diverse function. Many of the genes encode...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686596/ https://www.ncbi.nlm.nih.gov/pubmed/18838392 http://dx.doi.org/10.1093/nar/gkn662 |
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author | Robinson, James Waller, Matthew J. Fail, Sylvie C. McWilliam, Hamish Lopez, Rodrigo Parham, Peter Marsh, Steven G. E. |
author_facet | Robinson, James Waller, Matthew J. Fail, Sylvie C. McWilliam, Hamish Lopez, Rodrigo Parham, Peter Marsh, Steven G. E. |
author_sort | Robinson, James |
collection | PubMed |
description | It is 10 years since the IMGT/HLA database was released, providing the HLA community with a searchable repository of highly curated HLA sequences. The HLA complex is located within the 6p21.3 region of human chromosome 6 and contains more than 220 genes of diverse function. Many of the genes encode proteins of the immune system and are highly polymorphic. The naming of these HLA genes and alleles, and their quality control is the responsibility of the WHO Nomenclature Committee for Factors of the HLA System. Through the work of the HLA Informatics Group and in collaboration with the European Bioinformatics Institute, we are able to provide public access to this data through the website http://www.ebi.ac.uk/imgt/hla/. The first release contained 964 sequences, the most recent release 3300 sequences, with around 450 new sequences been added each year. The tools provided on the website have been updated to allow more complex alignments, which include genomic sequence data, as well as the development of tools for probe and primer design and the inclusion of data from the HLA Dictionary. Regular updates to the website ensure that new and confirmatory sequences are dispersed to the HLA community, and the wider research and clinical communities. |
format | Text |
id | pubmed-2686596 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-26865962009-05-26 The IMGT/HLA database Robinson, James Waller, Matthew J. Fail, Sylvie C. McWilliam, Hamish Lopez, Rodrigo Parham, Peter Marsh, Steven G. E. Nucleic Acids Res Articles It is 10 years since the IMGT/HLA database was released, providing the HLA community with a searchable repository of highly curated HLA sequences. The HLA complex is located within the 6p21.3 region of human chromosome 6 and contains more than 220 genes of diverse function. Many of the genes encode proteins of the immune system and are highly polymorphic. The naming of these HLA genes and alleles, and their quality control is the responsibility of the WHO Nomenclature Committee for Factors of the HLA System. Through the work of the HLA Informatics Group and in collaboration with the European Bioinformatics Institute, we are able to provide public access to this data through the website http://www.ebi.ac.uk/imgt/hla/. The first release contained 964 sequences, the most recent release 3300 sequences, with around 450 new sequences been added each year. The tools provided on the website have been updated to allow more complex alignments, which include genomic sequence data, as well as the development of tools for probe and primer design and the inclusion of data from the HLA Dictionary. Regular updates to the website ensure that new and confirmatory sequences are dispersed to the HLA community, and the wider research and clinical communities. Oxford University Press 2009-01 2008-10-05 /pmc/articles/PMC2686596/ /pubmed/18838392 http://dx.doi.org/10.1093/nar/gkn662 Text en © 2008 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Robinson, James Waller, Matthew J. Fail, Sylvie C. McWilliam, Hamish Lopez, Rodrigo Parham, Peter Marsh, Steven G. E. The IMGT/HLA database |
title | The IMGT/HLA database |
title_full | The IMGT/HLA database |
title_fullStr | The IMGT/HLA database |
title_full_unstemmed | The IMGT/HLA database |
title_short | The IMGT/HLA database |
title_sort | imgt/hla database |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686596/ https://www.ncbi.nlm.nih.gov/pubmed/18838392 http://dx.doi.org/10.1093/nar/gkn662 |
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