The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

In FANTOM4, an international collaborative research project, we collected a wide range of genome-scale data, including 24 million mRNA 5'-reads (CAGE tags) and microarray expression profiles along a differentiation time course of the human THP-1 cell line and under 52 systematic siRNA perturbat...

Descripción completa

Detalles Bibliográficos
Autores principales: Kawaji, Hideya, Severin, Jessica, Lizio, Marina, Waterhouse, Andrew, Katayama, Shintaro, Irvine, Katharine M, Hume, David A, Forrest, Alistair RR, Suzuki, Harukazu, Carninci, Piero, Hayashizaki, Yoshihide, Daub, Carsten O
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688931/
https://www.ncbi.nlm.nih.gov/pubmed/19374775
http://dx.doi.org/10.1186/gb-2009-10-4-r40
Descripción
Sumario:In FANTOM4, an international collaborative research project, we collected a wide range of genome-scale data, including 24 million mRNA 5'-reads (CAGE tags) and microarray expression profiles along a differentiation time course of the human THP-1 cell line and under 52 systematic siRNA perturbations. In addition, data regarding chromatin status derived from ChIP-chip to elucidate the transcriptional regulatory interactions are included. Here we present these data to the research community as an integrated web resource.

Ejemplares similares