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Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing

The biological functions of poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins (hnRNPs) are not well understood. However, it is known that hnRNPs are involved in the regulation of alternative splicing for many genes, including the Ddc gene in Drosophila. Therefore, we first confirmed...

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Autores principales: Ji, Yingbiao, Tulin, Alexei V.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2699505/
https://www.ncbi.nlm.nih.gov/pubmed/19346337
http://dx.doi.org/10.1093/nar/gkp218
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author Ji, Yingbiao
Tulin, Alexei V.
author_facet Ji, Yingbiao
Tulin, Alexei V.
author_sort Ji, Yingbiao
collection PubMed
description The biological functions of poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins (hnRNPs) are not well understood. However, it is known that hnRNPs are involved in the regulation of alternative splicing for many genes, including the Ddc gene in Drosophila. Therefore, we first confirmed that poly(ADP-ribose) (pADPr) interacts with two Drosophila hnRNPs, Squid/hrp40 and Hrb98DE/hrp38, and that this function is regulated by Poly(ADP-ribose) Polymerase 1 (PARP1) and Poly(ADP-ribose) Glycohydrolase (PARG) in vivo. These findings then provided a basis for analyzing the role of pADPr binding to these two hnRNPs in terms of alternative splicing regulation. Our results showed that Parg null mutation does cause poly(ADP-ribosyl)ation of Squid and hrp38 protein, as well as their dissociation from active chromatin. Our data also indicated that pADPr binding to hnRNPs inhibits the RNA-binding ability of hnRNPs. Following that, we demonstrated that poly(ADP-ribosyl)ation of Squid and hrp38 proteins inhibits splicing of the intron in the Hsrω-RC transcript, but enhances splicing of the intron in the Ddc pre-mRNA. Taken together, these findings suggest that poly(ADP-ribosyl)ation regulates the interaction between hnRNPs and RNA and thus modulates the splicing pathways.
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spelling pubmed-26995052009-06-22 Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing Ji, Yingbiao Tulin, Alexei V. Nucleic Acids Res Gene Regulation, Chromatin and Epigenetics The biological functions of poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins (hnRNPs) are not well understood. However, it is known that hnRNPs are involved in the regulation of alternative splicing for many genes, including the Ddc gene in Drosophila. Therefore, we first confirmed that poly(ADP-ribose) (pADPr) interacts with two Drosophila hnRNPs, Squid/hrp40 and Hrb98DE/hrp38, and that this function is regulated by Poly(ADP-ribose) Polymerase 1 (PARP1) and Poly(ADP-ribose) Glycohydrolase (PARG) in vivo. These findings then provided a basis for analyzing the role of pADPr binding to these two hnRNPs in terms of alternative splicing regulation. Our results showed that Parg null mutation does cause poly(ADP-ribosyl)ation of Squid and hrp38 protein, as well as their dissociation from active chromatin. Our data also indicated that pADPr binding to hnRNPs inhibits the RNA-binding ability of hnRNPs. Following that, we demonstrated that poly(ADP-ribosyl)ation of Squid and hrp38 proteins inhibits splicing of the intron in the Hsrω-RC transcript, but enhances splicing of the intron in the Ddc pre-mRNA. Taken together, these findings suggest that poly(ADP-ribosyl)ation regulates the interaction between hnRNPs and RNA and thus modulates the splicing pathways. Oxford University Press 2009-06 2009-04-03 /pmc/articles/PMC2699505/ /pubmed/19346337 http://dx.doi.org/10.1093/nar/gkp218 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Gene Regulation, Chromatin and Epigenetics
Ji, Yingbiao
Tulin, Alexei V.
Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title_full Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title_fullStr Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title_full_unstemmed Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title_short Poly(ADP-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
title_sort poly(adp-ribosyl)ation of heterogeneous nuclear ribonucleoproteins modulates splicing
topic Gene Regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2699505/
https://www.ncbi.nlm.nih.gov/pubmed/19346337
http://dx.doi.org/10.1093/nar/gkp218
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