Cargando…
Local and global effects of strong DNA bending induced during molecular dynamics simulations
DNA bending plays an important role in many biological processes, but its molecular and energetic details as a function of base sequence remain to be fully understood. Using a recently developed restraint, we have studied the controlled bending of four different B-DNA oligomers using molecular dynam...
Autores principales: | Curuksu, Jeremy, Zacharias, Martin, Lavery, Richard, Zakrzewska, Krystyna |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2699519/ https://www.ncbi.nlm.nih.gov/pubmed/19380377 http://dx.doi.org/10.1093/nar/gkp234 |
Ejemplares similares
-
Magnitude and direction of DNA bending induced by screw-axis orientation: influence of sequence, mismatches and abasic sites
por: Curuksu, Jeremy, et al.
Publicado: (2008) -
Analyzing DNA curvature and its impact on the ionic environment: application to molecular dynamics simulations of minicircles
por: Pasi, Marco, et al.
Publicado: (2017) -
Sequence-dependent response of DNA to torsional stress: a potential biological regulation mechanism
por: Reymer, Anna, et al.
Publicado: (2018) -
Unraveling the sequence-dependent polymorphic behavior of d(CpG) steps in B-DNA
por: Dans, Pablo Daniel, et al.
Publicado: (2014) -
DNA sequence and methylation prescribe the inside-out conformational dynamics and bending energetics of DNA minicircles
por: Yoo, Jejoong, et al.
Publicado: (2021)