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Understanding Structural Features of Microbial Lipases—An Overview

The structural elucidations of microbial lipases have been of prime interest since the 1980s. Knowledge of structural features plays an important role in designing and engineering lipases for specific purposes. Significant structural data have been presented for few microbial lipases, while, there i...

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Detalles Bibliográficos
Autores principales: Mala, John Geraldine Sandana, Takeuchi, Satoru
Formato: Texto
Lenguaje:English
Publicado: Libertas Academica 2008
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2701168/
https://www.ncbi.nlm.nih.gov/pubmed/19609386
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author Mala, John Geraldine Sandana
Takeuchi, Satoru
author_facet Mala, John Geraldine Sandana
Takeuchi, Satoru
author_sort Mala, John Geraldine Sandana
collection PubMed
description The structural elucidations of microbial lipases have been of prime interest since the 1980s. Knowledge of structural features plays an important role in designing and engineering lipases for specific purposes. Significant structural data have been presented for few microbial lipases, while, there is still a structure-deficit, that is, most lipase structures are yet to be resolved. A search for ‘lipase structure’ in the RCSB Protein Data Bank (http://www.rcsb.org/pdb/) returns only 93 hits (as of September 2007) and, the NCBI database (http://www.ncbi.nlm.nih.gov) reports 89 lipase structures as compared to 14719 core nucleotide records. It is therefore worthwhile to consider investigations on the structural analysis of microbial lipases. This review is intended to provide a collection of resources on the instrumental, chemical and bioinformatics approaches for structure analyses. X-ray crystallography is a versatile tool for the structural biochemists and is been exploited till today. The chemical methods of recent interests include molecular modeling and combinatorial designs. Bioinformatics has surged striking interests in protein structural analysis with the advent of innumerable tools. Furthermore, a literature platform of the structural elucidations so far investigated has been presented with detailed descriptions as applicable to microbial lipases. A case study of Candida rugosa lipase (CRL) has also been discussed which highlights important structural features also common to most lipases. A general profile of lipase has been vividly described with an overview of lipase research reviewed in the past.
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spelling pubmed-27011682009-07-16 Understanding Structural Features of Microbial Lipases—An Overview Mala, John Geraldine Sandana Takeuchi, Satoru Anal Chem Insights Review The structural elucidations of microbial lipases have been of prime interest since the 1980s. Knowledge of structural features plays an important role in designing and engineering lipases for specific purposes. Significant structural data have been presented for few microbial lipases, while, there is still a structure-deficit, that is, most lipase structures are yet to be resolved. A search for ‘lipase structure’ in the RCSB Protein Data Bank (http://www.rcsb.org/pdb/) returns only 93 hits (as of September 2007) and, the NCBI database (http://www.ncbi.nlm.nih.gov) reports 89 lipase structures as compared to 14719 core nucleotide records. It is therefore worthwhile to consider investigations on the structural analysis of microbial lipases. This review is intended to provide a collection of resources on the instrumental, chemical and bioinformatics approaches for structure analyses. X-ray crystallography is a versatile tool for the structural biochemists and is been exploited till today. The chemical methods of recent interests include molecular modeling and combinatorial designs. Bioinformatics has surged striking interests in protein structural analysis with the advent of innumerable tools. Furthermore, a literature platform of the structural elucidations so far investigated has been presented with detailed descriptions as applicable to microbial lipases. A case study of Candida rugosa lipase (CRL) has also been discussed which highlights important structural features also common to most lipases. A general profile of lipase has been vividly described with an overview of lipase research reviewed in the past. Libertas Academica 2008-03-27 /pmc/articles/PMC2701168/ /pubmed/19609386 Text en Copyright © 2008 The authors. http://creativecommons.org/licenses/by/3.0 This article is published under the Creative Commons Attribution By licence. For further information go to: http://creativecommons.org/licenses/by/3.0. (http://creativecommons.org/licenses/by/3.0)
spellingShingle Review
Mala, John Geraldine Sandana
Takeuchi, Satoru
Understanding Structural Features of Microbial Lipases—An Overview
title Understanding Structural Features of Microbial Lipases—An Overview
title_full Understanding Structural Features of Microbial Lipases—An Overview
title_fullStr Understanding Structural Features of Microbial Lipases—An Overview
title_full_unstemmed Understanding Structural Features of Microbial Lipases—An Overview
title_short Understanding Structural Features of Microbial Lipases—An Overview
title_sort understanding structural features of microbial lipases—an overview
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2701168/
https://www.ncbi.nlm.nih.gov/pubmed/19609386
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