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WebLab: a data-centric, knowledge-sharing bioinformatic platform
With the rapid progress of biological research, great demands are proposed for integrative knowledge-sharing systems to efficiently support collaboration of biological researchers from various fields. To fulfill such requirements, we have developed a data-centric knowledge-sharing platform WebLab fo...
Autores principales: | , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703900/ https://www.ncbi.nlm.nih.gov/pubmed/19465388 http://dx.doi.org/10.1093/nar/gkp428 |
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author | Liu, Xiaoqiao Wu, Jianmin Wang, Jun Liu, Xiaochuan Zhao, Shuqi Li, Zhe Kong, Lei Gu, Xiaocheng Luo, Jingchu Gao, Ge |
author_facet | Liu, Xiaoqiao Wu, Jianmin Wang, Jun Liu, Xiaochuan Zhao, Shuqi Li, Zhe Kong, Lei Gu, Xiaocheng Luo, Jingchu Gao, Ge |
author_sort | Liu, Xiaoqiao |
collection | PubMed |
description | With the rapid progress of biological research, great demands are proposed for integrative knowledge-sharing systems to efficiently support collaboration of biological researchers from various fields. To fulfill such requirements, we have developed a data-centric knowledge-sharing platform WebLab for biologists to fetch, analyze, manipulate and share data under an intuitive web interface. Dedicated space is provided for users to store their input data and analysis results. Users can upload local data or fetch public data from remote databases, and then perform analysis using more than 260 integrated bioinformatic tools. These tools can be further organized as customized analysis workflows to accomplish complex tasks automatically. In addition to conventional biological data, WebLab also provides rich supports for scientific literatures, such as searching against full text of uploaded literatures and exporting citations into various well-known citation managers such as EndNote and BibTex. To facilitate team work among colleagues, WebLab provides a powerful and flexible sharing mechanism, which allows users to share input data, analysis results, scientific literatures and customized workflows to specified users or groups with sophisticated privilege settings. WebLab is publicly available at http://weblab.cbi.pku.edu.cn, with all source code released as Free Software. |
format | Text |
id | pubmed-2703900 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27039002009-07-01 WebLab: a data-centric, knowledge-sharing bioinformatic platform Liu, Xiaoqiao Wu, Jianmin Wang, Jun Liu, Xiaochuan Zhao, Shuqi Li, Zhe Kong, Lei Gu, Xiaocheng Luo, Jingchu Gao, Ge Nucleic Acids Res Articles With the rapid progress of biological research, great demands are proposed for integrative knowledge-sharing systems to efficiently support collaboration of biological researchers from various fields. To fulfill such requirements, we have developed a data-centric knowledge-sharing platform WebLab for biologists to fetch, analyze, manipulate and share data under an intuitive web interface. Dedicated space is provided for users to store their input data and analysis results. Users can upload local data or fetch public data from remote databases, and then perform analysis using more than 260 integrated bioinformatic tools. These tools can be further organized as customized analysis workflows to accomplish complex tasks automatically. In addition to conventional biological data, WebLab also provides rich supports for scientific literatures, such as searching against full text of uploaded literatures and exporting citations into various well-known citation managers such as EndNote and BibTex. To facilitate team work among colleagues, WebLab provides a powerful and flexible sharing mechanism, which allows users to share input data, analysis results, scientific literatures and customized workflows to specified users or groups with sophisticated privilege settings. WebLab is publicly available at http://weblab.cbi.pku.edu.cn, with all source code released as Free Software. Oxford University Press 2009-07-01 2009-05-22 /pmc/articles/PMC2703900/ /pubmed/19465388 http://dx.doi.org/10.1093/nar/gkp428 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Liu, Xiaoqiao Wu, Jianmin Wang, Jun Liu, Xiaochuan Zhao, Shuqi Li, Zhe Kong, Lei Gu, Xiaocheng Luo, Jingchu Gao, Ge WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title | WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title_full | WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title_fullStr | WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title_full_unstemmed | WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title_short | WebLab: a data-centric, knowledge-sharing bioinformatic platform |
title_sort | weblab: a data-centric, knowledge-sharing bioinformatic platform |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703900/ https://www.ncbi.nlm.nih.gov/pubmed/19465388 http://dx.doi.org/10.1093/nar/gkp428 |
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