The Microbe browser for comparative genomics

The Microbe browser is a web server providing comparative microbial genomics data. It offers comprehensive, integrated data from GenBank, RefSeq, UniProt, InterPro, Gene Ontology and the Orthologs Matrix Project (OMA) database, displayed along with gene predictions from five software packages. The M...

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Detalles Bibliográficos
Autores principales: Gattiker, Alexandre, Dessimoz, Christophe, Schneider, Adrian, Xenarios, Ioannis, Pagni, Marco, Rougemont, Jacques
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703916/
https://www.ncbi.nlm.nih.gov/pubmed/19406928
http://dx.doi.org/10.1093/nar/gkp268
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author Gattiker, Alexandre
Dessimoz, Christophe
Schneider, Adrian
Xenarios, Ioannis
Pagni, Marco
Rougemont, Jacques
author_facet Gattiker, Alexandre
Dessimoz, Christophe
Schneider, Adrian
Xenarios, Ioannis
Pagni, Marco
Rougemont, Jacques
author_sort Gattiker, Alexandre
collection PubMed
description The Microbe browser is a web server providing comparative microbial genomics data. It offers comprehensive, integrated data from GenBank, RefSeq, UniProt, InterPro, Gene Ontology and the Orthologs Matrix Project (OMA) database, displayed along with gene predictions from five software packages. The Microbe browser is daily updated from the source databases and includes all completely sequenced bacterial and archaeal genomes. The data are displayed in an easy-to-use, interactive website based on Ensembl software. The Microbe browser is available at http://microbe.vital-it.ch/. Programmatic access is available through the OMA application programming interface (API) at http://microbe.vital-it.ch/api.
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spelling pubmed-27039162009-07-01 The Microbe browser for comparative genomics Gattiker, Alexandre Dessimoz, Christophe Schneider, Adrian Xenarios, Ioannis Pagni, Marco Rougemont, Jacques Nucleic Acids Res Articles The Microbe browser is a web server providing comparative microbial genomics data. It offers comprehensive, integrated data from GenBank, RefSeq, UniProt, InterPro, Gene Ontology and the Orthologs Matrix Project (OMA) database, displayed along with gene predictions from five software packages. The Microbe browser is daily updated from the source databases and includes all completely sequenced bacterial and archaeal genomes. The data are displayed in an easy-to-use, interactive website based on Ensembl software. The Microbe browser is available at http://microbe.vital-it.ch/. Programmatic access is available through the OMA application programming interface (API) at http://microbe.vital-it.ch/api. Oxford University Press 2009-07-01 2009-04-30 /pmc/articles/PMC2703916/ /pubmed/19406928 http://dx.doi.org/10.1093/nar/gkp268 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Gattiker, Alexandre
Dessimoz, Christophe
Schneider, Adrian
Xenarios, Ioannis
Pagni, Marco
Rougemont, Jacques
The Microbe browser for comparative genomics
title The Microbe browser for comparative genomics
title_full The Microbe browser for comparative genomics
title_fullStr The Microbe browser for comparative genomics
title_full_unstemmed The Microbe browser for comparative genomics
title_short The Microbe browser for comparative genomics
title_sort microbe browser for comparative genomics
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703916/
https://www.ncbi.nlm.nih.gov/pubmed/19406928
http://dx.doi.org/10.1093/nar/gkp268
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