GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists

GeneSet2miRNA is the first web-based tool which is able to identify whether or not a gene list has a signature of miRNA-regulatory activity. As input, GeneSet2miRNA accepts a list of genes. As output, a list of miRNA-regulatory models is provided. A miRNA-regulatory model is a group of miRNAs (singl...

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Detalles Bibliográficos
Autores principales: Antonov, Alexey V., Dietmann, Sabine, Wong, Philip, Lutter, Dominik, Mewes, Hans W.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703952/
https://www.ncbi.nlm.nih.gov/pubmed/19420064
http://dx.doi.org/10.1093/nar/gkp313
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author Antonov, Alexey V.
Dietmann, Sabine
Wong, Philip
Lutter, Dominik
Mewes, Hans W.
author_facet Antonov, Alexey V.
Dietmann, Sabine
Wong, Philip
Lutter, Dominik
Mewes, Hans W.
author_sort Antonov, Alexey V.
collection PubMed
description GeneSet2miRNA is the first web-based tool which is able to identify whether or not a gene list has a signature of miRNA-regulatory activity. As input, GeneSet2miRNA accepts a list of genes. As output, a list of miRNA-regulatory models is provided. A miRNA-regulatory model is a group of miRNAs (single, pair, triplet or quadruplet) that is predicted to regulate a significant subset of genes from the submitted list. GeneSet2miRNA provides a user friendly dialog-driven web page submission available for several model organisms. GeneSet2miRNA is freely available at http://mips.helmholtz-muenchen.de/proj/gene2mir/.
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spelling pubmed-27039522009-07-01 GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists Antonov, Alexey V. Dietmann, Sabine Wong, Philip Lutter, Dominik Mewes, Hans W. Nucleic Acids Res Articles GeneSet2miRNA is the first web-based tool which is able to identify whether or not a gene list has a signature of miRNA-regulatory activity. As input, GeneSet2miRNA accepts a list of genes. As output, a list of miRNA-regulatory models is provided. A miRNA-regulatory model is a group of miRNAs (single, pair, triplet or quadruplet) that is predicted to regulate a significant subset of genes from the submitted list. GeneSet2miRNA provides a user friendly dialog-driven web page submission available for several model organisms. GeneSet2miRNA is freely available at http://mips.helmholtz-muenchen.de/proj/gene2mir/. Oxford University Press 2009-07-01 2009-05-06 /pmc/articles/PMC2703952/ /pubmed/19420064 http://dx.doi.org/10.1093/nar/gkp313 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Antonov, Alexey V.
Dietmann, Sabine
Wong, Philip
Lutter, Dominik
Mewes, Hans W.
GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title_full GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title_fullStr GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title_full_unstemmed GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title_short GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists
title_sort geneset2mirna: finding the signature of cooperative mirna activities in the gene lists
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703952/
https://www.ncbi.nlm.nih.gov/pubmed/19420064
http://dx.doi.org/10.1093/nar/gkp313
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