BioMart Central Portal—unified access to biological data

BioMart Central Portal (www.biomart.org) offers a one-stop shop solution to access a wide array of biological databases. These include major biomolecular sequence, pathway and annotation databases such as Ensembl, Uniprot, Reactome, HGNC, Wormbase and PRIDE; for a complete list, visit, http://www.bi...

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Detalles Bibliográficos
Autores principales: Haider, Syed, Ballester, Benoit, Smedley, Damian, Zhang, Junjun, Rice, Peter, Kasprzyk, Arek
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703988/
https://www.ncbi.nlm.nih.gov/pubmed/19420058
http://dx.doi.org/10.1093/nar/gkp265
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author Haider, Syed
Ballester, Benoit
Smedley, Damian
Zhang, Junjun
Rice, Peter
Kasprzyk, Arek
author_facet Haider, Syed
Ballester, Benoit
Smedley, Damian
Zhang, Junjun
Rice, Peter
Kasprzyk, Arek
author_sort Haider, Syed
collection PubMed
description BioMart Central Portal (www.biomart.org) offers a one-stop shop solution to access a wide array of biological databases. These include major biomolecular sequence, pathway and annotation databases such as Ensembl, Uniprot, Reactome, HGNC, Wormbase and PRIDE; for a complete list, visit, http://www.biomart.org/biomart/martview. Moreover, the web server features seamless data federation making cross querying of these data sources in a user friendly and unified way. The web server not only provides access through a web interface (MartView), it also supports programmatic access through a Perl API as well as RESTful and SOAP oriented web services. The website is free and open to all users and there is no login requirement.
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spelling pubmed-27039882009-07-01 BioMart Central Portal—unified access to biological data Haider, Syed Ballester, Benoit Smedley, Damian Zhang, Junjun Rice, Peter Kasprzyk, Arek Nucleic Acids Res Articles BioMart Central Portal (www.biomart.org) offers a one-stop shop solution to access a wide array of biological databases. These include major biomolecular sequence, pathway and annotation databases such as Ensembl, Uniprot, Reactome, HGNC, Wormbase and PRIDE; for a complete list, visit, http://www.biomart.org/biomart/martview. Moreover, the web server features seamless data federation making cross querying of these data sources in a user friendly and unified way. The web server not only provides access through a web interface (MartView), it also supports programmatic access through a Perl API as well as RESTful and SOAP oriented web services. The website is free and open to all users and there is no login requirement. Oxford University Press 2009-07-01 2009-05-06 /pmc/articles/PMC2703988/ /pubmed/19420058 http://dx.doi.org/10.1093/nar/gkp265 Text en © 2009 The Author(s) http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Haider, Syed
Ballester, Benoit
Smedley, Damian
Zhang, Junjun
Rice, Peter
Kasprzyk, Arek
BioMart Central Portal—unified access to biological data
title BioMart Central Portal—unified access to biological data
title_full BioMart Central Portal—unified access to biological data
title_fullStr BioMart Central Portal—unified access to biological data
title_full_unstemmed BioMart Central Portal—unified access to biological data
title_short BioMart Central Portal—unified access to biological data
title_sort biomart central portal—unified access to biological data
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2703988/
https://www.ncbi.nlm.nih.gov/pubmed/19420058
http://dx.doi.org/10.1093/nar/gkp265
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AT ricepeter biomartcentralportalunifiedaccesstobiologicaldata
AT kasprzykarek biomartcentralportalunifiedaccesstobiologicaldata

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