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Hypothesis testing for the genetic background of quantitative traits

The testing of Bayesian point null hypotheses on variance component models have resulted in a tough assignment for which no clear and generally accepted method exists. In this work we present what we believe is a succeeding approach to such a task. It is based on a simple reparameterization of the m...

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Detalles Bibliográficos
Autores principales: García-Cortés, Luis Alberto, Cabrillo, Carlos, Moreno, Carlos, Varona, Luis
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2001
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705381/
https://www.ncbi.nlm.nih.gov/pubmed/11268311
http://dx.doi.org/10.1186/1297-9686-33-1-3
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author García-Cortés, Luis Alberto
Cabrillo, Carlos
Moreno, Carlos
Varona, Luis
author_facet García-Cortés, Luis Alberto
Cabrillo, Carlos
Moreno, Carlos
Varona, Luis
author_sort García-Cortés, Luis Alberto
collection PubMed
description The testing of Bayesian point null hypotheses on variance component models have resulted in a tough assignment for which no clear and generally accepted method exists. In this work we present what we believe is a succeeding approach to such a task. It is based on a simple reparameterization of the model in terms of the total variance and the proportion of the additive genetic variance with respect to it, as well as on the explicit inclusion on the prior probability of a discrete component at origin. The reparameterization was used to bypass an arbitrariness related to the impropriety of uninformative priors onto unbounded variables while the discrete component was necessary to overcome the zero probability assigned to sets of null measure by the usual continuous variable models. The method was tested against computer simulations with appealing results.
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spelling pubmed-27053812009-07-03 Hypothesis testing for the genetic background of quantitative traits García-Cortés, Luis Alberto Cabrillo, Carlos Moreno, Carlos Varona, Luis Genet Sel Evol Research The testing of Bayesian point null hypotheses on variance component models have resulted in a tough assignment for which no clear and generally accepted method exists. In this work we present what we believe is a succeeding approach to such a task. It is based on a simple reparameterization of the model in terms of the total variance and the proportion of the additive genetic variance with respect to it, as well as on the explicit inclusion on the prior probability of a discrete component at origin. The reparameterization was used to bypass an arbitrariness related to the impropriety of uninformative priors onto unbounded variables while the discrete component was necessary to overcome the zero probability assigned to sets of null measure by the usual continuous variable models. The method was tested against computer simulations with appealing results. BioMed Central 2001-01-15 /pmc/articles/PMC2705381/ /pubmed/11268311 http://dx.doi.org/10.1186/1297-9686-33-1-3 Text en Copyright © 2001 INRA, EDP Sciences
spellingShingle Research
García-Cortés, Luis Alberto
Cabrillo, Carlos
Moreno, Carlos
Varona, Luis
Hypothesis testing for the genetic background of quantitative traits
title Hypothesis testing for the genetic background of quantitative traits
title_full Hypothesis testing for the genetic background of quantitative traits
title_fullStr Hypothesis testing for the genetic background of quantitative traits
title_full_unstemmed Hypothesis testing for the genetic background of quantitative traits
title_short Hypothesis testing for the genetic background of quantitative traits
title_sort hypothesis testing for the genetic background of quantitative traits
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705381/
https://www.ncbi.nlm.nih.gov/pubmed/11268311
http://dx.doi.org/10.1186/1297-9686-33-1-3
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