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A higher resolution radiation hybrid map of bovine chromosome 13

In this paper, we present a radiation hybrid framework map of BTA13 composed of nine microsatellite loci, six genes and one EST. The map has been developed using a recently constructed 12'000 rad bovine-hamster whole-genome radiation hybrid panel. Moreover, we present a comprehensive map of BTA...

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Detalles Bibliográficos
Autores principales: Schläpfer, Jörg, Stahlberger-Saitbekova, Nasikhat, Comincini, Sergio, Gaillard, Claude, Hills, David, Meyer, Rudolf K, Williams, John L, Womack, Jim E, Zurbriggen, Andreas, Dolf, Gaudenz
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2002
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705431/
https://www.ncbi.nlm.nih.gov/pubmed/12081811
http://dx.doi.org/10.1186/1297-9686-34-2-255
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author Schläpfer, Jörg
Stahlberger-Saitbekova, Nasikhat
Comincini, Sergio
Gaillard, Claude
Hills, David
Meyer, Rudolf K
Williams, John L
Womack, Jim E
Zurbriggen, Andreas
Dolf, Gaudenz
author_facet Schläpfer, Jörg
Stahlberger-Saitbekova, Nasikhat
Comincini, Sergio
Gaillard, Claude
Hills, David
Meyer, Rudolf K
Williams, John L
Womack, Jim E
Zurbriggen, Andreas
Dolf, Gaudenz
author_sort Schläpfer, Jörg
collection PubMed
description In this paper, we present a radiation hybrid framework map of BTA13 composed of nine microsatellite loci, six genes and one EST. The map has been developed using a recently constructed 12'000 rad bovine-hamster whole-genome radiation hybrid panel. Moreover, we present a comprehensive map of BTA13 comprising 72 loci, of which 45 are microsatellites, 20 are genes and seven are ESTs. The map has an estimated length of 2694.7 cR(12'000). The proposed order is in general agreement with published maps of BTA13. Our results only partially support previously published information of five blocks of conserved gene order between cattle and man. We found no evidence for the existence of an HSA20 homologous segment of coding DNA on BTA13 located centromeric of a confirmed HSA10 homologous region. The present map increases the marker density and the marker resolution on BTA13 and enables further insight into the evolutionary development of the chromosome as compared to man.
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spelling pubmed-27054312009-07-03 A higher resolution radiation hybrid map of bovine chromosome 13 Schläpfer, Jörg Stahlberger-Saitbekova, Nasikhat Comincini, Sergio Gaillard, Claude Hills, David Meyer, Rudolf K Williams, John L Womack, Jim E Zurbriggen, Andreas Dolf, Gaudenz Genet Sel Evol Research In this paper, we present a radiation hybrid framework map of BTA13 composed of nine microsatellite loci, six genes and one EST. The map has been developed using a recently constructed 12'000 rad bovine-hamster whole-genome radiation hybrid panel. Moreover, we present a comprehensive map of BTA13 comprising 72 loci, of which 45 are microsatellites, 20 are genes and seven are ESTs. The map has an estimated length of 2694.7 cR(12'000). The proposed order is in general agreement with published maps of BTA13. Our results only partially support previously published information of five blocks of conserved gene order between cattle and man. We found no evidence for the existence of an HSA20 homologous segment of coding DNA on BTA13 located centromeric of a confirmed HSA10 homologous region. The present map increases the marker density and the marker resolution on BTA13 and enables further insight into the evolutionary development of the chromosome as compared to man. BioMed Central 2002-03-15 /pmc/articles/PMC2705431/ /pubmed/12081811 http://dx.doi.org/10.1186/1297-9686-34-2-255 Text en Copyright © 2002 INRA, EDP Sciences
spellingShingle Research
Schläpfer, Jörg
Stahlberger-Saitbekova, Nasikhat
Comincini, Sergio
Gaillard, Claude
Hills, David
Meyer, Rudolf K
Williams, John L
Womack, Jim E
Zurbriggen, Andreas
Dolf, Gaudenz
A higher resolution radiation hybrid map of bovine chromosome 13
title A higher resolution radiation hybrid map of bovine chromosome 13
title_full A higher resolution radiation hybrid map of bovine chromosome 13
title_fullStr A higher resolution radiation hybrid map of bovine chromosome 13
title_full_unstemmed A higher resolution radiation hybrid map of bovine chromosome 13
title_short A higher resolution radiation hybrid map of bovine chromosome 13
title_sort higher resolution radiation hybrid map of bovine chromosome 13
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705431/
https://www.ncbi.nlm.nih.gov/pubmed/12081811
http://dx.doi.org/10.1186/1297-9686-34-2-255
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