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The PX-EM algorithm for fast stable fitting of Henderson's mixed model

This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g...

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Detalles Bibliográficos
Autores principales: Foulley, Jean-Louis, Van Dyk, David A
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2000
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2706867/
https://www.ncbi.nlm.nih.gov/pubmed/14736399
http://dx.doi.org/10.1186/1297-9686-32-2-143
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author Foulley, Jean-Louis
Van Dyk, David A
author_facet Foulley, Jean-Louis
Van Dyk, David A
author_sort Foulley, Jean-Louis
collection PubMed
description This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g., as in random regression models for longitudinal data analysis and in sire-maternal grandsire models for genetic evaluation. Numerical examples are presented to illustrate the procedures. Much better results in terms of convergence characteristics (number of iterations and time required for convergence) are obtained for PX-EM relative to the basic EM algorithm in the random regression.
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spelling pubmed-27068672009-07-08 The PX-EM algorithm for fast stable fitting of Henderson's mixed model Foulley, Jean-Louis Van Dyk, David A Genet Sel Evol Research This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g., as in random regression models for longitudinal data analysis and in sire-maternal grandsire models for genetic evaluation. Numerical examples are presented to illustrate the procedures. Much better results in terms of convergence characteristics (number of iterations and time required for convergence) are obtained for PX-EM relative to the basic EM algorithm in the random regression. BioMed Central 2000-03-15 /pmc/articles/PMC2706867/ /pubmed/14736399 http://dx.doi.org/10.1186/1297-9686-32-2-143 Text en Copyright © 2000 INRA, EDP Sciences
spellingShingle Research
Foulley, Jean-Louis
Van Dyk, David A
The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title_full The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title_fullStr The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title_full_unstemmed The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title_short The PX-EM algorithm for fast stable fitting of Henderson's mixed model
title_sort px-em algorithm for fast stable fitting of henderson's mixed model
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2706867/
https://www.ncbi.nlm.nih.gov/pubmed/14736399
http://dx.doi.org/10.1186/1297-9686-32-2-143
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