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The PX-EM algorithm for fast stable fitting of Henderson's mixed model
This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2000
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2706867/ https://www.ncbi.nlm.nih.gov/pubmed/14736399 http://dx.doi.org/10.1186/1297-9686-32-2-143 |
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author | Foulley, Jean-Louis Van Dyk, David A |
author_facet | Foulley, Jean-Louis Van Dyk, David A |
author_sort | Foulley, Jean-Louis |
collection | PubMed |
description | This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g., as in random regression models for longitudinal data analysis and in sire-maternal grandsire models for genetic evaluation. Numerical examples are presented to illustrate the procedures. Much better results in terms of convergence characteristics (number of iterations and time required for convergence) are obtained for PX-EM relative to the basic EM algorithm in the random regression. |
format | Text |
id | pubmed-2706867 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2000 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-27068672009-07-08 The PX-EM algorithm for fast stable fitting of Henderson's mixed model Foulley, Jean-Louis Van Dyk, David A Genet Sel Evol Research This paper presents procedures for implementing the PX-EM algorithm of Liu, Rubin and Wu to compute REML estimates of variance covariance components in Henderson's linear mixed models. The class of models considered encompasses several correlated random factors having the same vector length e.g., as in random regression models for longitudinal data analysis and in sire-maternal grandsire models for genetic evaluation. Numerical examples are presented to illustrate the procedures. Much better results in terms of convergence characteristics (number of iterations and time required for convergence) are obtained for PX-EM relative to the basic EM algorithm in the random regression. BioMed Central 2000-03-15 /pmc/articles/PMC2706867/ /pubmed/14736399 http://dx.doi.org/10.1186/1297-9686-32-2-143 Text en Copyright © 2000 INRA, EDP Sciences |
spellingShingle | Research Foulley, Jean-Louis Van Dyk, David A The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title | The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title_full | The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title_fullStr | The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title_full_unstemmed | The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title_short | The PX-EM algorithm for fast stable fitting of Henderson's mixed model |
title_sort | px-em algorithm for fast stable fitting of henderson's mixed model |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2706867/ https://www.ncbi.nlm.nih.gov/pubmed/14736399 http://dx.doi.org/10.1186/1297-9686-32-2-143 |
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