Cargando…

Mapping of heterologous expressed sequence tags as an alternative to microarrays for study of defense responses in plants

BACKGROUND: Microarray technology helped to accumulate an immense pool of data on gene expression changes in response to different environmental factors. Yet, computer- generated gene profiling using expressed sequence tags (EST) represents a valuable alternative to microarrays, which allows efficie...

Descripción completa

Detalles Bibliográficos
Autores principales:	Boutanaev, Alexander M, Postnikova, Olga A, Nemchinov, Lev G
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2009
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2706895/ https://www.ncbi.nlm.nih.gov/pubmed/19538747 http://dx.doi.org/10.1186/1471-2164-10-273

Ejemplares similares

Virus-induced gene silencing of the RPC5-like subunit of RNA polymerase III caused pleiotropic effects in Nicotiana benthamiana
por: Nemchinov, Lev G., et al.
Publicado: (2016)

Comparative analysis of microarray data in Arabidopsis transcriptome during compatible interactions with plant viruses
por: Postnikova, Olga A, et al.
Publicado: (2012)

Genome-wide identification of endogenous viral sequences in alfalfa (Medicago sativa L.)
por: Boutanaev, Alexander M., et al.
Publicado: (2021)

Complete Genome Sequence of the Alfalfa latent virus
por: Nemchinov, Lev G., et al.
Publicado: (2015)

Gene Expression Profiling in Viable but Nonculturable (VBNC) Cells of Pseudomonas syringae pv. syringae
por: Postnikova, Olga A., et al.
Publicado: (2015)

Snake River alfalfa virus, a persistent virus infecting alfalfa (Medicago sativa L.) in Washington State, USA
por: Postnikova, Olga A., et al.
Publicado: (2023)

Characterization of the seed virome of alfalfa (Medicago sativa L)
por: Nemchinov, Lev G., et al.
Publicado: (2023)

Transcriptome Analysis of Resistant and Susceptible Alfalfa Cultivars Infected With Root-Knot Nematode Meloidogyne incognita
por: Postnikova, Olga A., et al.
Publicado: (2015)

Resistant and susceptible responses in alfalfa (Medicago sativa) to bacterial stem blight caused by Pseudomonas syringae pv. syringae
por: Nemchinov, Lev G., et al.
Publicado: (2017)

Alfalfa vein mottling virus, a novel potyvirid infecting Medicago sativa L.
por: Nemchinov, Lev G., et al.
Publicado: (2023)

Composition of the alfalfa pathobiome in commercial fields
por: Nemchinov, Lev G., et al.
Publicado: (2023)

A Chimeric Affinity Tag for Efficient Expression and Chromatographic Purification of Heterologous Proteins from Plants
por: Sainsbury, Frank, et al.
Publicado: (2016)

Patterns of gene expression in microarrays and expressed sequence tags from normal and cataractous lenses
por: Sousounis, Konstantinos, et al.
Publicado: (2012)

Unraveling regulatory networks in plant defense using microarrays
por: Rowland, Owen, et al.
Publicado: (2001)

Is there an alternative to increasing the sample size in microarray studies?
por: Klebanov, Lev, et al.
Publicado: (2007)

Alternative Splicing and Expression Profile Analysis of Expressed Sequence Tags in Domestic Pig
por: Zhang, Liang, et al.
Publicado: (2007)

High-Throughput Sequencing for Deciphering the Virome of Alfalfa (Medicago sativa L.)
por: Bejerman, Nicolas, et al.
Publicado: (2020)

Yeast Heterologous Expression Systems for the Study of Plant Membrane Proteins
por: Popova, Larissa G., et al.
Publicado: (2023)

PathoPlant(®): a platform for microarray expression data to analyze co-regulated genes involved in plant defense responses
por: Bülow, Lorenz, et al.
Publicado: (2007)

Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information
por: Chen, Yian A, et al.
Publicado: (2004)

First Report and Complete Genome Sequence of Alfalfa Enamovirus from Sudan
por: Nemchinov, Lev G., et al.
Publicado: (2017)

Differential gene expression in recombinant Pichia pastoris analysed by heterologous DNA microarray hybridisation
por: Sauer, Michael, et al.
Publicado: (2004)

Cytogenetic mapping of 25 goat mammary gland Expressed Sequence Tags (ESTs)
por: Le Provost, Fabienne, et al.
Publicado: (2000)

Targeting a heterologous protein to multiple plant organelles via rationally designed 5′ mRNA tags
por: Voges, Mathias J, et al.
Publicado: (2013)

Evaluation of Genome Sequencing Quality in Selected Plant Species Using Expressed Sequence Tags
por: Shangguan, Lingfei, et al.
Publicado: (2013)

Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis
por: Llorens, Franc, et al.
Publicado: (2011)

Rhodamine-Tagged Polymethacrylate Dyes as Alternative Tools for Analysis of Plant Cells
por: Bielas, Rafał, et al.
Publicado: (2022)

TagSmart: analysis and visualization for yeast mutant fitness data measured by tag microarrays
por: Kim, Chulyun, et al.
Publicado: (2007)

Comparative mapping of expressed sequence tags containing microsatellites in rainbow trout (Oncorhynchus mykiss)
por: Rexroad, Caird E, et al.
Publicado: (2005)

Identification, analysis, and linkage mapping of expressed sequence tags from the Australian sheep blowfly
por: Lee, Siu F, et al.
Publicado: (2011)

Stimulation of homologous recombination in plants expressing heterologous recombinases
por: Barakate, Abdellah, et al.
Publicado: (2020)

Ubiquitin-like prokaryotic MoaD as a fusion tag for expression of heterologous proteins in Escherichia coli
por: Yuan, Sujuan, et al.
Publicado: (2014)

Fungal His-Tagged Nitrilase from Gibberella intermedia: Gene Cloning, Heterologous Expression and Biochemical Properties
por: Gong, Jin-Song, et al.
Publicado: (2012)

Heterologous expression of a novel linoleic acid isomerase BBI, and effect of fusion tags on its performance
por: Mei, Yongchao, et al.
Publicado: (2022)

Expressed sequence tag analysis in Cycas, the most primitive living seed plant
por: Brenner, Eric D, et al.
Publicado: (2003)

Identification and Characterization of Microsatellites in Expressed Sequence Tags and Their Cross Transferability in Different Plants
por: Haq, Shamshad ul, et al.
Publicado: (2014)

NLS-tagging: an alternative strategy to tag nuclear proteins
por: Giraud, Guillaume, et al.
Publicado: (2014)

Development of expressed sequence tag and expressed sequence tag–simple sequence repeat marker resources for Musa acuminata
por: Passos, Marco A. N., et al.
Publicado: (2012)

Incorporation of alternative amino acids into cyanophycin by different cyanophycin synthetases heterologously expressed in Corynebacterium glutamicum
por: Wördemann, Ramona, et al.
Publicado: (2021)

Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray
por: Renn, Susan CP, et al.
Publicado: (2004)

Cannot write session to /tmp/vufind_sessions/sess_i5qm0fqprm44easjo69f3v03ue