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Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population
BACKGROUND: To investigate whether the GPDS1 locus, a potential causative locus of pigment-dispersion syndrome, is associated with normal-tension glaucoma (NTG) in Japanese patients. MATERIALS AND METHODS: We used polymerase chain reaction amplification with sequence-specific primers to analyze 20 p...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Dove Medical Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2708999/ https://www.ncbi.nlm.nih.gov/pubmed/19668583 |
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author | Nakamura, Kayo Ota, Masao Meguro, Akira Nomura, Naoko Kashiwagi, Kenji Mabuchi, Fumihiko Iijima, Hiroyuki Kawase, Kazuhide Yamamoto, Tetsuya Nakamura, Makoto Negi, Akira Sagara, Takeshi Nishida, Teruo Inatani, Masaru Tanihara, Hidenobu Aihara, Makoto Araie, Makoto Fukuchi, Takeo Abe, Haruki Higashide, Tomomi Sugiyama, Kazuhisa Kanamoto, Takashi Kiuchi, Yoshiaki Iwase, Aiko Ohno, Shigeaki Inoko, Hidetoshi Mizuki, Nobuhisa |
author_facet | Nakamura, Kayo Ota, Masao Meguro, Akira Nomura, Naoko Kashiwagi, Kenji Mabuchi, Fumihiko Iijima, Hiroyuki Kawase, Kazuhide Yamamoto, Tetsuya Nakamura, Makoto Negi, Akira Sagara, Takeshi Nishida, Teruo Inatani, Masaru Tanihara, Hidenobu Aihara, Makoto Araie, Makoto Fukuchi, Takeo Abe, Haruki Higashide, Tomomi Sugiyama, Kazuhisa Kanamoto, Takashi Kiuchi, Yoshiaki Iwase, Aiko Ohno, Shigeaki Inoko, Hidetoshi Mizuki, Nobuhisa |
author_sort | Nakamura, Kayo |
collection | PubMed |
description | BACKGROUND: To investigate whether the GPDS1 locus, a potential causative locus of pigment-dispersion syndrome, is associated with normal-tension glaucoma (NTG) in Japanese patients. MATERIALS AND METHODS: We used polymerase chain reaction amplification with sequence-specific primers to analyze 20 polymorphic microsatellite markers in and around the GPDS1 locus with an automated DNA analyzer and automated fragment detection by fluorescent-based technology. The DNA samples used for these analyses were obtained from ethnicity- and gender-matched patients, including 141 Japanese patients with NTG and 101 healthy controls. Patients exhibiting a comparatively early onset were selected as this suggests that genetic factors may show stronger involvement. RESULTS: One allele of D7S2462 exhibited a frequency that was significantly decreased in NTG cases compared to controls (P = 0.0013, Pc = 0.019, OR = 0.48, 95% CI = 0.30–0.75). Alleles at another six microsatellite loci were positively or negatively associated with NTG, but these associations did not retain statistical significance after Bonferroni correction (P < 0.05, Pc > 0.05). CONCLUSION: Our study showed a significant association between the GPDS1 locus and NTG, suggesting that there may be some genetic risk factor(s) in the development of NTG. |
format | Text |
id | pubmed-2708999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Dove Medical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27089992009-08-10 Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population Nakamura, Kayo Ota, Masao Meguro, Akira Nomura, Naoko Kashiwagi, Kenji Mabuchi, Fumihiko Iijima, Hiroyuki Kawase, Kazuhide Yamamoto, Tetsuya Nakamura, Makoto Negi, Akira Sagara, Takeshi Nishida, Teruo Inatani, Masaru Tanihara, Hidenobu Aihara, Makoto Araie, Makoto Fukuchi, Takeo Abe, Haruki Higashide, Tomomi Sugiyama, Kazuhisa Kanamoto, Takashi Kiuchi, Yoshiaki Iwase, Aiko Ohno, Shigeaki Inoko, Hidetoshi Mizuki, Nobuhisa Clin Ophthalmol Original Research BACKGROUND: To investigate whether the GPDS1 locus, a potential causative locus of pigment-dispersion syndrome, is associated with normal-tension glaucoma (NTG) in Japanese patients. MATERIALS AND METHODS: We used polymerase chain reaction amplification with sequence-specific primers to analyze 20 polymorphic microsatellite markers in and around the GPDS1 locus with an automated DNA analyzer and automated fragment detection by fluorescent-based technology. The DNA samples used for these analyses were obtained from ethnicity- and gender-matched patients, including 141 Japanese patients with NTG and 101 healthy controls. Patients exhibiting a comparatively early onset were selected as this suggests that genetic factors may show stronger involvement. RESULTS: One allele of D7S2462 exhibited a frequency that was significantly decreased in NTG cases compared to controls (P = 0.0013, Pc = 0.019, OR = 0.48, 95% CI = 0.30–0.75). Alleles at another six microsatellite loci were positively or negatively associated with NTG, but these associations did not retain statistical significance after Bonferroni correction (P < 0.05, Pc > 0.05). CONCLUSION: Our study showed a significant association between the GPDS1 locus and NTG, suggesting that there may be some genetic risk factor(s) in the development of NTG. Dove Medical Press 2009 2009-06-02 /pmc/articles/PMC2708999/ /pubmed/19668583 Text en © 2009 Nakamura et al, publisher and licensee Dove Medical Press Ltd. This is an Open Access article which permits unrestricted noncommercial use, provided the original work is properly cited. |
spellingShingle | Original Research Nakamura, Kayo Ota, Masao Meguro, Akira Nomura, Naoko Kashiwagi, Kenji Mabuchi, Fumihiko Iijima, Hiroyuki Kawase, Kazuhide Yamamoto, Tetsuya Nakamura, Makoto Negi, Akira Sagara, Takeshi Nishida, Teruo Inatani, Masaru Tanihara, Hidenobu Aihara, Makoto Araie, Makoto Fukuchi, Takeo Abe, Haruki Higashide, Tomomi Sugiyama, Kazuhisa Kanamoto, Takashi Kiuchi, Yoshiaki Iwase, Aiko Ohno, Shigeaki Inoko, Hidetoshi Mizuki, Nobuhisa Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title | Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title_full | Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title_fullStr | Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title_full_unstemmed | Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title_short | Association of microsatellite polymorphisms of the GPDS1 locus with normal tension glaucoma in the Japanese population |
title_sort | association of microsatellite polymorphisms of the gpds1 locus with normal tension glaucoma in the japanese population |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2708999/ https://www.ncbi.nlm.nih.gov/pubmed/19668583 |
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