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Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features
Streptozocin has been shown to be useful in the clinical treatment of malignant neuroendocrine tumors of the pancreas. The poor prognosis for patients having malignant tumors of pancreas suggests the investigation and development of new therapeutics. Nine analogs to streptozocin are determined by in...
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Formato: | Texto |
Lenguaje: | English |
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Bentham Open
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2709472/ https://www.ncbi.nlm.nih.gov/pubmed/19662148 http://dx.doi.org/10.2174/1874104500802010081 |
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author | Bartzatt, Ronald |
author_facet | Bartzatt, Ronald |
author_sort | Bartzatt, Ronald |
collection | PubMed |
description | Streptozocin has been shown to be useful in the clinical treatment of malignant neuroendocrine tumors of the pancreas. The poor prognosis for patients having malignant tumors of pancreas suggests the investigation and development of new therapeutics. Nine analogs to streptozocin are determined by in silico physicochemical analysis and generation of structures by modeling from functional group isosteres. In these analogs is preserved the alkylating nitrosourea moiety, however, the covalently bonded substituent has significant hydrogen bonding sites and may include a ring structure. Analogs retain a broad range in lipophilicity, having a range of Log P from -2.798 (hydrophilic) to 3.001 (lipophilic). Standard deviation of molecular masses is only 12.6% of the group mean, so a small alteration in size occurs which is also reflected by only a 15.5% deviation in molecular volumes. Streptozocin and seven analogs show zero violations of the Rule of 5 which suggests favorable bioavailability. All compounds showed at least seven hydrogen bond acceptors with a strong positive correlation between hydrophilicity to the total number of hydrogen bond acceptors and donors. Analysis of similarity (ANOSIM) and discriminant analysis determined that streptozocin is highly similar to all nine analogs. However hierarchical cluster analysis and K-means cluster analysis were able to elucidate patterns of associations and differentiation among the ten compounds. This study demonstrates the efficacy of utilizing in silico optimization and pattern recognition to elucidate potential anticancer drugs. |
format | Text |
id | pubmed-2709472 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Bentham Open |
record_format | MEDLINE/PubMed |
spelling | pubmed-27094722009-08-06 Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features Bartzatt, Ronald Open Med Chem J Article Streptozocin has been shown to be useful in the clinical treatment of malignant neuroendocrine tumors of the pancreas. The poor prognosis for patients having malignant tumors of pancreas suggests the investigation and development of new therapeutics. Nine analogs to streptozocin are determined by in silico physicochemical analysis and generation of structures by modeling from functional group isosteres. In these analogs is preserved the alkylating nitrosourea moiety, however, the covalently bonded substituent has significant hydrogen bonding sites and may include a ring structure. Analogs retain a broad range in lipophilicity, having a range of Log P from -2.798 (hydrophilic) to 3.001 (lipophilic). Standard deviation of molecular masses is only 12.6% of the group mean, so a small alteration in size occurs which is also reflected by only a 15.5% deviation in molecular volumes. Streptozocin and seven analogs show zero violations of the Rule of 5 which suggests favorable bioavailability. All compounds showed at least seven hydrogen bond acceptors with a strong positive correlation between hydrophilicity to the total number of hydrogen bond acceptors and donors. Analysis of similarity (ANOSIM) and discriminant analysis determined that streptozocin is highly similar to all nine analogs. However hierarchical cluster analysis and K-means cluster analysis were able to elucidate patterns of associations and differentiation among the ten compounds. This study demonstrates the efficacy of utilizing in silico optimization and pattern recognition to elucidate potential anticancer drugs. Bentham Open 2008-09-02 /pmc/articles/PMC2709472/ /pubmed/19662148 http://dx.doi.org/10.2174/1874104500802010081 Text en © Ronald Bartzatt; Licensee Bentham Open. http://creativecommons.org/licenses/by-nc/3.0/ This is an open access article licensed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited. |
spellingShingle | Article Bartzatt, Ronald Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title | Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title_full | Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title_fullStr | Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title_full_unstemmed | Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title_short | Design of Anticancer Agents Utilizing Streptozocin for In Silico Optimization of Properties and Pattern Recognition Identification of Group Features |
title_sort | design of anticancer agents utilizing streptozocin for in silico optimization of properties and pattern recognition identification of group features |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2709472/ https://www.ncbi.nlm.nih.gov/pubmed/19662148 http://dx.doi.org/10.2174/1874104500802010081 |
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