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Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus

Avian infectious bronchitis virus (IBV) is a prototype of the group III coronaviruses and encodes 15 nonstructural proteins which make up the transcription/replication machinery. The nsp2 protein from IBV has a unique and novel sequence and has no experimentally confirmed function in replication, wh...

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Detalles Bibliográficos
Autores principales: Yang, Anqi, Wei, Lei, Zhao, Weiran, Xu, Yuanyuan, Rao, Zihe
Formato: Texto
Lenguaje:English
Publicado: International Union of Crystallography 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2720334/
https://www.ncbi.nlm.nih.gov/pubmed/19652340
http://dx.doi.org/10.1107/S1744309109024749
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author Yang, Anqi
Wei, Lei
Zhao, Weiran
Xu, Yuanyuan
Rao, Zihe
author_facet Yang, Anqi
Wei, Lei
Zhao, Weiran
Xu, Yuanyuan
Rao, Zihe
author_sort Yang, Anqi
collection PubMed
description Avian infectious bronchitis virus (IBV) is a prototype of the group III coronaviruses and encodes 15 nonstructural proteins which make up the transcription/replication machinery. The nsp2 protein from IBV has a unique and novel sequence and has no experimentally confirmed function in replication, whereas it has been proposed to be crucial for early viral infection and may inhibit the early host immune response. The gene that encodes a double-mutant IBV nsp2 N-terminal domain (residues 9–393 of the polyprotein, with mutations Q132L and L270F) was cloned and expressed in Escherichia coli and the protein was subjected to crystallization trials. The crystals diffracted to 2.5 Å resolution and belonged to space group P6(2) or P6(4), with unit-cell parameters a = b = 114.2, c = 61.0 Å, α = β = 90, γ = 120°. Each asymmetric unit contained one molecule.
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spelling pubmed-27203342011-08-01 Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus Yang, Anqi Wei, Lei Zhao, Weiran Xu, Yuanyuan Rao, Zihe Acta Crystallogr Sect F Struct Biol Cryst Commun Crystallization Communications Avian infectious bronchitis virus (IBV) is a prototype of the group III coronaviruses and encodes 15 nonstructural proteins which make up the transcription/replication machinery. The nsp2 protein from IBV has a unique and novel sequence and has no experimentally confirmed function in replication, whereas it has been proposed to be crucial for early viral infection and may inhibit the early host immune response. The gene that encodes a double-mutant IBV nsp2 N-terminal domain (residues 9–393 of the polyprotein, with mutations Q132L and L270F) was cloned and expressed in Escherichia coli and the protein was subjected to crystallization trials. The crystals diffracted to 2.5 Å resolution and belonged to space group P6(2) or P6(4), with unit-cell parameters a = b = 114.2, c = 61.0 Å, α = β = 90, γ = 120°. Each asymmetric unit contained one molecule. International Union of Crystallography 2009-07-25 /pmc/articles/PMC2720334/ /pubmed/19652340 http://dx.doi.org/10.1107/S1744309109024749 Text en © International Union of Crystallography 2009
spellingShingle Crystallization Communications
Yang, Anqi
Wei, Lei
Zhao, Weiran
Xu, Yuanyuan
Rao, Zihe
Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title_full Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title_fullStr Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title_full_unstemmed Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title_short Expression, crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of nsp2 from avian infectious bronchitis virus
title_sort expression, crystallization and preliminary x-ray diffraction analysis of the n-terminal domain of nsp2 from avian infectious bronchitis virus
topic Crystallization Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2720334/
https://www.ncbi.nlm.nih.gov/pubmed/19652340
http://dx.doi.org/10.1107/S1744309109024749
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