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A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium

To identify the susceptibility gene in hand osteoarthritis (OA) the authors used a two-stage approach genome-wide association study using two discovery samples (the TwinsUK cohort and the Rotterdam discovery subset; a total of 1804 subjects) and four replication samples (the Chingford Study, the Chu...

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Autores principales: Zhai, G, van Meurs, J B J, Livshits, G, Meulenbelt, I, Valdes, A M, Soranzo, N, Hart, D, Zhang, F, Kato, B S, Richards, J B, Williams, F M K, Inouye, M, Kloppenburg, M, Deloukas, P, Slagboom, E, Uitterlinden, A, Spector, T D
Formato: Texto
Lenguaje:English
Publicado: BMJ Group 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2729370/
https://www.ncbi.nlm.nih.gov/pubmed/19508968
http://dx.doi.org/10.1136/jmg.2009.067314
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author Zhai, G
van Meurs, J B J
Livshits, G
Meulenbelt, I
Valdes, A M
Soranzo, N
Hart, D
Zhang, F
Kato, B S
Richards, J B
Williams, F M K
Inouye, M
Kloppenburg, M
Deloukas, P
Slagboom, E
Uitterlinden, A
Spector, T D
author_facet Zhai, G
van Meurs, J B J
Livshits, G
Meulenbelt, I
Valdes, A M
Soranzo, N
Hart, D
Zhang, F
Kato, B S
Richards, J B
Williams, F M K
Inouye, M
Kloppenburg, M
Deloukas, P
Slagboom, E
Uitterlinden, A
Spector, T D
author_sort Zhai, G
collection PubMed
description To identify the susceptibility gene in hand osteoarthritis (OA) the authors used a two-stage approach genome-wide association study using two discovery samples (the TwinsUK cohort and the Rotterdam discovery subset; a total of 1804 subjects) and four replication samples (the Chingford Study, the Chuvasha Skeletal Aging Study, the Rotterdam replication subset and the Genetics, Arthrosis, and Progression (GARP) Study; a total of 3266 people). Five single-nucleotide polymorphisms (SNPs) had a likelihood of association with hand OA in the discovery stage and one of them (rs716508), was successfully confirmed in the replication stage (meta-analysis p = 1.81×10(−5)). The C allele conferred a reduced risk of 33% to 41% using a case–control definition. The SNP is located in intron 1 of the A2BP1 gene. This study also found that the same allele of the SNP significantly reduced bone density at both the hip and spine (p<0.01), suggesting the potential mechanism of the gene in hand OA might be via effects on subchondral bone. The authors' findings provide a potential new insight into genetic mechanisms in the development of hand OA.
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spelling pubmed-27293702009-08-27 A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium Zhai, G van Meurs, J B J Livshits, G Meulenbelt, I Valdes, A M Soranzo, N Hart, D Zhang, F Kato, B S Richards, J B Williams, F M K Inouye, M Kloppenburg, M Deloukas, P Slagboom, E Uitterlinden, A Spector, T D J Med Genet Short Report To identify the susceptibility gene in hand osteoarthritis (OA) the authors used a two-stage approach genome-wide association study using two discovery samples (the TwinsUK cohort and the Rotterdam discovery subset; a total of 1804 subjects) and four replication samples (the Chingford Study, the Chuvasha Skeletal Aging Study, the Rotterdam replication subset and the Genetics, Arthrosis, and Progression (GARP) Study; a total of 3266 people). Five single-nucleotide polymorphisms (SNPs) had a likelihood of association with hand OA in the discovery stage and one of them (rs716508), was successfully confirmed in the replication stage (meta-analysis p = 1.81×10(−5)). The C allele conferred a reduced risk of 33% to 41% using a case–control definition. The SNP is located in intron 1 of the A2BP1 gene. This study also found that the same allele of the SNP significantly reduced bone density at both the hip and spine (p<0.01), suggesting the potential mechanism of the gene in hand OA might be via effects on subchondral bone. The authors' findings provide a potential new insight into genetic mechanisms in the development of hand OA. BMJ Group 2009-09 2009-06-24 /pmc/articles/PMC2729370/ /pubmed/19508968 http://dx.doi.org/10.1136/jmg.2009.067314 Text en © Zhai et al 2009 http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Report
Zhai, G
van Meurs, J B J
Livshits, G
Meulenbelt, I
Valdes, A M
Soranzo, N
Hart, D
Zhang, F
Kato, B S
Richards, J B
Williams, F M K
Inouye, M
Kloppenburg, M
Deloukas, P
Slagboom, E
Uitterlinden, A
Spector, T D
A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title_full A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title_fullStr A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title_full_unstemmed A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title_short A genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the Treat-OA consortium
title_sort genome-wide association study suggests that a locus within the ataxin 2 binding protein 1 gene is associated with hand osteoarthritis: the treat-oa consortium
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2729370/
https://www.ncbi.nlm.nih.gov/pubmed/19508968
http://dx.doi.org/10.1136/jmg.2009.067314
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