Cargando…

On the need for a control line in selection experiments: A likelihood analysis

The question of whether selection experiments ought to include a control line, as opposed to investing all facilities in a single selected line, is addressed using a likelihood perspective. The consequences of using a control line are evaluated under two scenarios. In the first one, environmental tr...

Descripción completa

Detalles Bibliográficos
Autores principales: Sorensen, Daniel, Guldbrandtsen, Bernt, Jensen, Just
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2732688/
https://www.ncbi.nlm.nih.gov/pubmed/12605848
http://dx.doi.org/10.1186/1297-9686-35-1-3
_version_ 1782171072521568256
author Sorensen, Daniel
Guldbrandtsen, Bernt
Jensen, Just
author_facet Sorensen, Daniel
Guldbrandtsen, Bernt
Jensen, Just
author_sort Sorensen, Daniel
collection PubMed
description The question of whether selection experiments ought to include a control line, as opposed to investing all facilities in a single selected line, is addressed using a likelihood perspective. The consequences of using a control line are evaluated under two scenarios. In the first one, environmental trend is modeled and inferred from the data. In this case, a control line is shown to be highly beneficial in terms of the efficiency of inferences about eheritability and response to selection. In the second scenario, environmental trend is not modeled. One can imagine that a previous analysis of the experimental data had lent support to this decision. It is shown that in this situation where a control line may seem superfluous, inclusion of a control line can result in minor gains in efficiency if a high selection intensity is practiced in the selected line. Further, if there is a loss, it is moderately small. The results are verified to hold under more complicated data structures via Monte Carlo simulation. For completeness, divergent selection designs are also reviewed, and inferences based on a conditional and full likelihood approach are contrasted.
format Text
id pubmed-2732688
institution National Center for Biotechnology Information
language English
publishDate 2003
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-27326882009-08-27 On the need for a control line in selection experiments: A likelihood analysis Sorensen, Daniel Guldbrandtsen, Bernt Jensen, Just Genet Sel Evol Research The question of whether selection experiments ought to include a control line, as opposed to investing all facilities in a single selected line, is addressed using a likelihood perspective. The consequences of using a control line are evaluated under two scenarios. In the first one, environmental trend is modeled and inferred from the data. In this case, a control line is shown to be highly beneficial in terms of the efficiency of inferences about eheritability and response to selection. In the second scenario, environmental trend is not modeled. One can imagine that a previous analysis of the experimental data had lent support to this decision. It is shown that in this situation where a control line may seem superfluous, inclusion of a control line can result in minor gains in efficiency if a high selection intensity is practiced in the selected line. Further, if there is a loss, it is moderately small. The results are verified to hold under more complicated data structures via Monte Carlo simulation. For completeness, divergent selection designs are also reviewed, and inferences based on a conditional and full likelihood approach are contrasted. BioMed Central 2003-01-15 /pmc/articles/PMC2732688/ /pubmed/12605848 http://dx.doi.org/10.1186/1297-9686-35-1-3 Text en Copyright © 2003 INRA, EDP Sciences
spellingShingle Research
Sorensen, Daniel
Guldbrandtsen, Bernt
Jensen, Just
On the need for a control line in selection experiments: A likelihood analysis
title On the need for a control line in selection experiments: A likelihood analysis
title_full On the need for a control line in selection experiments: A likelihood analysis
title_fullStr On the need for a control line in selection experiments: A likelihood analysis
title_full_unstemmed On the need for a control line in selection experiments: A likelihood analysis
title_short On the need for a control line in selection experiments: A likelihood analysis
title_sort on the need for a control line in selection experiments: a likelihood analysis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2732688/
https://www.ncbi.nlm.nih.gov/pubmed/12605848
http://dx.doi.org/10.1186/1297-9686-35-1-3
work_keys_str_mv AT sorensendaniel ontheneedforacontrollineinselectionexperimentsalikelihoodanalysis
AT guldbrandtsenbernt ontheneedforacontrollineinselectionexperimentsalikelihoodanalysis
AT jensenjust ontheneedforacontrollineinselectionexperimentsalikelihoodanalysis