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Rich can get poor: conversion of hub to non-hub proteins

Hubs are ubiquitous network elements with high connectivity. One of the common observations about hub proteins is their preferential attachment leading to scale-free network topology. Here we examine the question: does rich protein always get richer, or can it get poor too? To answer this question,...

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Detalles Bibliográficos
Autores principales: Tun, Kyaw, Rao, Raghuraj Keshava, Samavedham, Lakshminarayanan, Tanaka, Hiroshi, Dhar, Pawan K.
Formato: Texto
Lenguaje:English
Publicado: Springer Netherlands 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735643/
https://www.ncbi.nlm.nih.gov/pubmed/19399641
http://dx.doi.org/10.1007/s11693-009-9024-9
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author Tun, Kyaw
Rao, Raghuraj Keshava
Samavedham, Lakshminarayanan
Tanaka, Hiroshi
Dhar, Pawan K.
author_facet Tun, Kyaw
Rao, Raghuraj Keshava
Samavedham, Lakshminarayanan
Tanaka, Hiroshi
Dhar, Pawan K.
author_sort Tun, Kyaw
collection PubMed
description Hubs are ubiquitous network elements with high connectivity. One of the common observations about hub proteins is their preferential attachment leading to scale-free network topology. Here we examine the question: does rich protein always get richer, or can it get poor too? To answer this question, we compared similar and well-annotated hub proteins in six organisms, from prokaryotes to eukaryotes. Our findings indicate that hub proteins retain, gain or lose connectivity based on the context. Furthermore, the loss or gain of connectivity appears to correlate with the functional role of the protein in a given system.
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spelling pubmed-27356432009-09-02 Rich can get poor: conversion of hub to non-hub proteins Tun, Kyaw Rao, Raghuraj Keshava Samavedham, Lakshminarayanan Tanaka, Hiroshi Dhar, Pawan K. Syst Synth Biol Research Article Hubs are ubiquitous network elements with high connectivity. One of the common observations about hub proteins is their preferential attachment leading to scale-free network topology. Here we examine the question: does rich protein always get richer, or can it get poor too? To answer this question, we compared similar and well-annotated hub proteins in six organisms, from prokaryotes to eukaryotes. Our findings indicate that hub proteins retain, gain or lose connectivity based on the context. Furthermore, the loss or gain of connectivity appears to correlate with the functional role of the protein in a given system. Springer Netherlands 2009-04-28 2008-12 /pmc/articles/PMC2735643/ /pubmed/19399641 http://dx.doi.org/10.1007/s11693-009-9024-9 Text en © The Author(s) 2009
spellingShingle Research Article
Tun, Kyaw
Rao, Raghuraj Keshava
Samavedham, Lakshminarayanan
Tanaka, Hiroshi
Dhar, Pawan K.
Rich can get poor: conversion of hub to non-hub proteins
title Rich can get poor: conversion of hub to non-hub proteins
title_full Rich can get poor: conversion of hub to non-hub proteins
title_fullStr Rich can get poor: conversion of hub to non-hub proteins
title_full_unstemmed Rich can get poor: conversion of hub to non-hub proteins
title_short Rich can get poor: conversion of hub to non-hub proteins
title_sort rich can get poor: conversion of hub to non-hub proteins
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735643/
https://www.ncbi.nlm.nih.gov/pubmed/19399641
http://dx.doi.org/10.1007/s11693-009-9024-9
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