IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites

IMAGE is an application tool, based on the vector quantization method, aiding the discovery of nucleotidic sequences corresponding to Transcription Factor binding sites. Starting from the knowledge of regulation regions of a number of co-expressed genes, the software is able to predict the occurrenc...

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Detalles Bibliográficos
Autores principales: Casilli, R., Marongiu, A., Melchionna, S., Palazzari, P., Paparcone, R., Rosato, V.
Formato: Texto
Lenguaje:English
Publicado: Libertas Academica 2008
Materias:
Original Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735968/
https://www.ncbi.nlm.nih.gov/pubmed/19812788
Descripción
Sumario:IMAGE is an application tool, based on the vector quantization method, aiding the discovery of nucleotidic sequences corresponding to Transcription Factor binding sites. Starting from the knowledge of regulation regions of a number of co-expressed genes, the software is able to predict the occurrence of specific motifs of different lengths (starting from 6 base pairs) with a defined number of punctual mutations.

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