IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites

IMAGE is an application tool, based on the vector quantization method, aiding the discovery of nucleotidic sequences corresponding to Transcription Factor binding sites. Starting from the knowledge of regulation regions of a number of co-expressed genes, the software is able to predict the occurrenc...

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Detalles Bibliográficos
Autores principales: Casilli, R., Marongiu, A., Melchionna, S., Palazzari, P., Paparcone, R., Rosato, V.
Formato: Texto
Lenguaje:English
Publicado: Libertas Academica 2008
Materias:
Original Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735968/
https://www.ncbi.nlm.nih.gov/pubmed/19812788
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author Casilli, R.
Marongiu, A.
Melchionna, S.
Palazzari, P.
Paparcone, R.
Rosato, V.
author_facet Casilli, R.
Marongiu, A.
Melchionna, S.
Palazzari, P.
Paparcone, R.
Rosato, V.
author_sort Casilli, R.
collection PubMed
description IMAGE is an application tool, based on the vector quantization method, aiding the discovery of nucleotidic sequences corresponding to Transcription Factor binding sites. Starting from the knowledge of regulation regions of a number of co-expressed genes, the software is able to predict the occurrence of specific motifs of different lengths (starting from 6 base pairs) with a defined number of punctual mutations.
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spelling pubmed-27359682009-09-14 IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites Casilli, R. Marongiu, A. Melchionna, S. Palazzari, P. Paparcone, R. Rosato, V. Bioinform Biol Insights Original Research IMAGE is an application tool, based on the vector quantization method, aiding the discovery of nucleotidic sequences corresponding to Transcription Factor binding sites. Starting from the knowledge of regulation regions of a number of co-expressed genes, the software is able to predict the occurrence of specific motifs of different lengths (starting from 6 base pairs) with a defined number of punctual mutations. Libertas Academica 2008-10-03 /pmc/articles/PMC2735968/ /pubmed/19812788 Text en Copyright © 2008 The authors. http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Original Research
Casilli, R.
Marongiu, A.
Melchionna, S.
Palazzari, P.
Paparcone, R.
Rosato, V.
IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title_full IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title_fullStr IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title_full_unstemmed IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title_short IMAGE: A New Tool for the Prediction of Transcription Factor Binding Sites
title_sort image: a new tool for the prediction of transcription factor binding sites
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735968/
https://www.ncbi.nlm.nih.gov/pubmed/19812788
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AT palazzarip imageanewtoolforthepredictionoftranscriptionfactorbindingsites
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AT rosatov imageanewtoolforthepredictionoftranscriptionfactorbindingsites

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