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Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations

BACKGROUND: A multiplicity of study designs such as gene candidate analysis, genome wide search (GWS) and, recently, whole genome association studies have been employed for the identification of the genetic components of essential hypertension (EH). Several genome-wide linkage studies of EH and bloo...

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Autores principales: Mocci, Evelina, Concas, Maria P, Fanciulli, Manuela, Pirastu, Nicola, Adamo, Mauro, Cabras, Valentina, Fraumene, Cristina, Persico, Ivana, Sassu, Alessandro, Picciau, Andrea, Prodi, Dionigio A, Serra, Donatella, Biino, Ginevra, Pirastu, Mario, Angius, Andrea
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2741446/
https://www.ncbi.nlm.nih.gov/pubmed/19715579
http://dx.doi.org/10.1186/1471-2350-10-81
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author Mocci, Evelina
Concas, Maria P
Fanciulli, Manuela
Pirastu, Nicola
Adamo, Mauro
Cabras, Valentina
Fraumene, Cristina
Persico, Ivana
Sassu, Alessandro
Picciau, Andrea
Prodi, Dionigio A
Serra, Donatella
Biino, Ginevra
Pirastu, Mario
Angius, Andrea
author_facet Mocci, Evelina
Concas, Maria P
Fanciulli, Manuela
Pirastu, Nicola
Adamo, Mauro
Cabras, Valentina
Fraumene, Cristina
Persico, Ivana
Sassu, Alessandro
Picciau, Andrea
Prodi, Dionigio A
Serra, Donatella
Biino, Ginevra
Pirastu, Mario
Angius, Andrea
author_sort Mocci, Evelina
collection PubMed
description BACKGROUND: A multiplicity of study designs such as gene candidate analysis, genome wide search (GWS) and, recently, whole genome association studies have been employed for the identification of the genetic components of essential hypertension (EH). Several genome-wide linkage studies of EH and blood pressure-related phenotypes demonstrate that there is no single locus with a major effect while several genomic regions likely to contain EH-susceptibility loci were validated by multiple studies. METHODS: We carried out the clinical assessment of the entire adult population in a Sardinian village (Talana) and we analyzed 16 selected families with 62 hypertensive subjects out of 267 individuals. We carried out a double GWS using a set of 902 uniformly spaced microsatellites and a high-density SNPs map on the same group of families. RESULTS: Three loci were identified by both microsatellites and SNP scans and the obtained linkage results showed a remarkable degree of similarity. These loci were identified on chromosome 2q24, 11q23.1–25 and 13q14.11–21.33. Further support to these findings is their broad description present in literature associated to EH or related phenotypes. Bioinformatic investigation of these loci shows several potential EH candidate genes, several of whom already associated to blood pressure regulation pathways. CONCLUSION: Our search for major susceptibility EH genetic factors evidences that EH in the genetic isolate of Talana is due to the contribution of several genes contained in loci identified and replicated by earlier findings in different human populations.
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spelling pubmed-27414462009-09-11 Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations Mocci, Evelina Concas, Maria P Fanciulli, Manuela Pirastu, Nicola Adamo, Mauro Cabras, Valentina Fraumene, Cristina Persico, Ivana Sassu, Alessandro Picciau, Andrea Prodi, Dionigio A Serra, Donatella Biino, Ginevra Pirastu, Mario Angius, Andrea BMC Med Genet Research Article BACKGROUND: A multiplicity of study designs such as gene candidate analysis, genome wide search (GWS) and, recently, whole genome association studies have been employed for the identification of the genetic components of essential hypertension (EH). Several genome-wide linkage studies of EH and blood pressure-related phenotypes demonstrate that there is no single locus with a major effect while several genomic regions likely to contain EH-susceptibility loci were validated by multiple studies. METHODS: We carried out the clinical assessment of the entire adult population in a Sardinian village (Talana) and we analyzed 16 selected families with 62 hypertensive subjects out of 267 individuals. We carried out a double GWS using a set of 902 uniformly spaced microsatellites and a high-density SNPs map on the same group of families. RESULTS: Three loci were identified by both microsatellites and SNP scans and the obtained linkage results showed a remarkable degree of similarity. These loci were identified on chromosome 2q24, 11q23.1–25 and 13q14.11–21.33. Further support to these findings is their broad description present in literature associated to EH or related phenotypes. Bioinformatic investigation of these loci shows several potential EH candidate genes, several of whom already associated to blood pressure regulation pathways. CONCLUSION: Our search for major susceptibility EH genetic factors evidences that EH in the genetic isolate of Talana is due to the contribution of several genes contained in loci identified and replicated by earlier findings in different human populations. BioMed Central 2009-08-28 /pmc/articles/PMC2741446/ /pubmed/19715579 http://dx.doi.org/10.1186/1471-2350-10-81 Text en Copyright © 2009 Mocci et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Mocci, Evelina
Concas, Maria P
Fanciulli, Manuela
Pirastu, Nicola
Adamo, Mauro
Cabras, Valentina
Fraumene, Cristina
Persico, Ivana
Sassu, Alessandro
Picciau, Andrea
Prodi, Dionigio A
Serra, Donatella
Biino, Ginevra
Pirastu, Mario
Angius, Andrea
Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title_full Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title_fullStr Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title_full_unstemmed Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title_short Microsatellites and SNPs linkage analysis in a Sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
title_sort microsatellites and snps linkage analysis in a sardinian genetic isolate confirms several essential hypertension loci previously identified in different populations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2741446/
https://www.ncbi.nlm.nih.gov/pubmed/19715579
http://dx.doi.org/10.1186/1471-2350-10-81
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