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Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways
Psoriasis is a common immune mediated disorder that affects the skin, nails, and joints. To identify psoriasis susceptibility loci, we genotyped 438,670 SNPs in 1,409 European ancestry psoriasis cases and 1,436 controls. Twenty-one promising SNPs were followed-up in 5,048 psoriasis cases and 5,041 c...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2745122/ https://www.ncbi.nlm.nih.gov/pubmed/19169254 http://dx.doi.org/10.1038/ng.311 |
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author | Nair, Rajan P. Duffin, Kristina Callis Helms, Cindy Ding, Jun Stuart, Philip E. Goldgar, David Gudjonsson, Johann E. Li, Yun Tejasvi, Trilokraj Feng, Bing Jian Ruether, Andreas Schreiber, Stefan Weichenthal, Michael Gladman, Dafna Rahman, Proton Schrodi, Steven J. Prahalad, Sampath Guthery, Stephen L Fischer, Judith Liao, Wilson Kwok, Pui-Yan Menter, Alan Lathrop, G. Mark Wise, Carol A. Begovich, Ann B. Voorhees, John J. Elder, James T. Krueger, Gerald G. Bowcock, Anne M. Abecasis, Gonçalo R. |
author_facet | Nair, Rajan P. Duffin, Kristina Callis Helms, Cindy Ding, Jun Stuart, Philip E. Goldgar, David Gudjonsson, Johann E. Li, Yun Tejasvi, Trilokraj Feng, Bing Jian Ruether, Andreas Schreiber, Stefan Weichenthal, Michael Gladman, Dafna Rahman, Proton Schrodi, Steven J. Prahalad, Sampath Guthery, Stephen L Fischer, Judith Liao, Wilson Kwok, Pui-Yan Menter, Alan Lathrop, G. Mark Wise, Carol A. Begovich, Ann B. Voorhees, John J. Elder, James T. Krueger, Gerald G. Bowcock, Anne M. Abecasis, Gonçalo R. |
author_sort | Nair, Rajan P. |
collection | PubMed |
description | Psoriasis is a common immune mediated disorder that affects the skin, nails, and joints. To identify psoriasis susceptibility loci, we genotyped 438,670 SNPs in 1,409 European ancestry psoriasis cases and 1,436 controls. Twenty-one promising SNPs were followed-up in 5,048 psoriasis cases and 5,041 controls. Our results provide strong support for the association of at least seven genetic loci and psoriasis (each with p < 5×10(−8) overall). Loci with confirmed association encode HLA-C, three genes involved in IL-23 signaling (IL23A, IL23R, IL12B), two genes that act downstream of TNF-α and regulate NF-κB signaling (TNIP1, TNFAIP3), and two genes involved in the modulation of Th2 immune responses (IL4, IL13). Although the proteins encoded in these loci are known to interact biologically, we found no evidence for epistasis between associated SNPs. Our results expand the catalog of genetic loci implicated in psoriasis susceptibility and suggest priority targets for study in other auto-immune disorders. |
format | Text |
id | pubmed-2745122 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
record_format | MEDLINE/PubMed |
spelling | pubmed-27451222009-09-16 Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways Nair, Rajan P. Duffin, Kristina Callis Helms, Cindy Ding, Jun Stuart, Philip E. Goldgar, David Gudjonsson, Johann E. Li, Yun Tejasvi, Trilokraj Feng, Bing Jian Ruether, Andreas Schreiber, Stefan Weichenthal, Michael Gladman, Dafna Rahman, Proton Schrodi, Steven J. Prahalad, Sampath Guthery, Stephen L Fischer, Judith Liao, Wilson Kwok, Pui-Yan Menter, Alan Lathrop, G. Mark Wise, Carol A. Begovich, Ann B. Voorhees, John J. Elder, James T. Krueger, Gerald G. Bowcock, Anne M. Abecasis, Gonçalo R. Nat Genet Article Psoriasis is a common immune mediated disorder that affects the skin, nails, and joints. To identify psoriasis susceptibility loci, we genotyped 438,670 SNPs in 1,409 European ancestry psoriasis cases and 1,436 controls. Twenty-one promising SNPs were followed-up in 5,048 psoriasis cases and 5,041 controls. Our results provide strong support for the association of at least seven genetic loci and psoriasis (each with p < 5×10(−8) overall). Loci with confirmed association encode HLA-C, three genes involved in IL-23 signaling (IL23A, IL23R, IL12B), two genes that act downstream of TNF-α and regulate NF-κB signaling (TNIP1, TNFAIP3), and two genes involved in the modulation of Th2 immune responses (IL4, IL13). Although the proteins encoded in these loci are known to interact biologically, we found no evidence for epistasis between associated SNPs. Our results expand the catalog of genetic loci implicated in psoriasis susceptibility and suggest priority targets for study in other auto-immune disorders. 2009-01-25 2009-02 /pmc/articles/PMC2745122/ /pubmed/19169254 http://dx.doi.org/10.1038/ng.311 Text en http://www.nature.com/authors/editorial_policies/license.html#terms Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Nair, Rajan P. Duffin, Kristina Callis Helms, Cindy Ding, Jun Stuart, Philip E. Goldgar, David Gudjonsson, Johann E. Li, Yun Tejasvi, Trilokraj Feng, Bing Jian Ruether, Andreas Schreiber, Stefan Weichenthal, Michael Gladman, Dafna Rahman, Proton Schrodi, Steven J. Prahalad, Sampath Guthery, Stephen L Fischer, Judith Liao, Wilson Kwok, Pui-Yan Menter, Alan Lathrop, G. Mark Wise, Carol A. Begovich, Ann B. Voorhees, John J. Elder, James T. Krueger, Gerald G. Bowcock, Anne M. Abecasis, Gonçalo R. Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title | Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title_full | Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title_fullStr | Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title_full_unstemmed | Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title_short | Genomewide Scan Reveals Association of Psoriasis with IL-23 and NF-κB Pathways |
title_sort | genomewide scan reveals association of psoriasis with il-23 and nf-κb pathways |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2745122/ https://www.ncbi.nlm.nih.gov/pubmed/19169254 http://dx.doi.org/10.1038/ng.311 |
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