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Filtering Medline for a clinical discipline: diagnostic test assessment framework

Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published...

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Autores principales: Garg, Amit X, Iansavichus, Arthur V, Wilczynski, Nancy L, Kastner, Monika, Baier, Leslie A, Shariff, Salimah Z, Rehman, Faisal, Weir, Matthew, McKibbon, K Ann, Haynes, R Brian
Formato: Texto
Lenguaje:English
Publicado: BMJ Publishing Group Ltd. 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746885/
https://www.ncbi.nlm.nih.gov/pubmed/19767336
http://dx.doi.org/10.1136/bmj.b3435
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author Garg, Amit X
Iansavichus, Arthur V
Wilczynski, Nancy L
Kastner, Monika
Baier, Leslie A
Shariff, Salimah Z
Rehman, Faisal
Weir, Matthew
McKibbon, K Ann
Haynes, R Brian
author_facet Garg, Amit X
Iansavichus, Arthur V
Wilczynski, Nancy L
Kastner, Monika
Baier, Leslie A
Shariff, Salimah Z
Rehman, Faisal
Weir, Matthew
McKibbon, K Ann
Haynes, R Brian
author_sort Garg, Amit X
collection PubMed
description Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published in 2006 from 40 journals. Reviews Each article was manually reviewed, and 19.8% contained information relevant to the discipline of nephrology. The performance of 1 155 087 unique renal filters was compared with the manual review. Main outcome measures Sensitivity, specificity, precision, and accuracy of each filter. Results The best renal filters combined two to 14 terms or phrases and included the terms “kidney” with multiple endings (that is, truncation), “renal replacement therapy”, “renal dialysis”, “kidney function tests”, “renal”, “nephr” truncated, “glomerul” truncated, and “proteinuria”. These filters achieved peak sensitivities of 97.8% and specificities of 98.5%. Performance of filters remained excellent in the validation phase. Conclusions Medline can be filtered for the discipline of nephrology in a reliable manner. Storing these high performance renal filters in PubMed could help clinicians with their everyday searching. Filters can also be developed for other clinical disciplines by using similar methods.
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spelling pubmed-27468852010-01-07 Filtering Medline for a clinical discipline: diagnostic test assessment framework Garg, Amit X Iansavichus, Arthur V Wilczynski, Nancy L Kastner, Monika Baier, Leslie A Shariff, Salimah Z Rehman, Faisal Weir, Matthew McKibbon, K Ann Haynes, R Brian BMJ Research Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published in 2006 from 40 journals. Reviews Each article was manually reviewed, and 19.8% contained information relevant to the discipline of nephrology. The performance of 1 155 087 unique renal filters was compared with the manual review. Main outcome measures Sensitivity, specificity, precision, and accuracy of each filter. Results The best renal filters combined two to 14 terms or phrases and included the terms “kidney” with multiple endings (that is, truncation), “renal replacement therapy”, “renal dialysis”, “kidney function tests”, “renal”, “nephr” truncated, “glomerul” truncated, and “proteinuria”. These filters achieved peak sensitivities of 97.8% and specificities of 98.5%. Performance of filters remained excellent in the validation phase. Conclusions Medline can be filtered for the discipline of nephrology in a reliable manner. Storing these high performance renal filters in PubMed could help clinicians with their everyday searching. Filters can also be developed for other clinical disciplines by using similar methods. BMJ Publishing Group Ltd. 2009-09-18 /pmc/articles/PMC2746885/ /pubmed/19767336 http://dx.doi.org/10.1136/bmj.b3435 Text en This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited, the use is non commercial and is otherwise in compliance with the license. See: http://creativecommons.org/licenses/by-nc/2.0/ and http://creativecommons.org/licenses/by-nc/2.0/legalcode.
spellingShingle Research
Garg, Amit X
Iansavichus, Arthur V
Wilczynski, Nancy L
Kastner, Monika
Baier, Leslie A
Shariff, Salimah Z
Rehman, Faisal
Weir, Matthew
McKibbon, K Ann
Haynes, R Brian
Filtering Medline for a clinical discipline: diagnostic test assessment framework
title Filtering Medline for a clinical discipline: diagnostic test assessment framework
title_full Filtering Medline for a clinical discipline: diagnostic test assessment framework
title_fullStr Filtering Medline for a clinical discipline: diagnostic test assessment framework
title_full_unstemmed Filtering Medline for a clinical discipline: diagnostic test assessment framework
title_short Filtering Medline for a clinical discipline: diagnostic test assessment framework
title_sort filtering medline for a clinical discipline: diagnostic test assessment framework
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746885/
https://www.ncbi.nlm.nih.gov/pubmed/19767336
http://dx.doi.org/10.1136/bmj.b3435
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