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Filtering Medline for a clinical discipline: diagnostic test assessment framework
Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published...
Autores principales: | , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BMJ Publishing Group Ltd.
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746885/ https://www.ncbi.nlm.nih.gov/pubmed/19767336 http://dx.doi.org/10.1136/bmj.b3435 |
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author | Garg, Amit X Iansavichus, Arthur V Wilczynski, Nancy L Kastner, Monika Baier, Leslie A Shariff, Salimah Z Rehman, Faisal Weir, Matthew McKibbon, K Ann Haynes, R Brian |
author_facet | Garg, Amit X Iansavichus, Arthur V Wilczynski, Nancy L Kastner, Monika Baier, Leslie A Shariff, Salimah Z Rehman, Faisal Weir, Matthew McKibbon, K Ann Haynes, R Brian |
author_sort | Garg, Amit X |
collection | PubMed |
description | Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published in 2006 from 40 journals. Reviews Each article was manually reviewed, and 19.8% contained information relevant to the discipline of nephrology. The performance of 1 155 087 unique renal filters was compared with the manual review. Main outcome measures Sensitivity, specificity, precision, and accuracy of each filter. Results The best renal filters combined two to 14 terms or phrases and included the terms “kidney” with multiple endings (that is, truncation), “renal replacement therapy”, “renal dialysis”, “kidney function tests”, “renal”, “nephr” truncated, “glomerul” truncated, and “proteinuria”. These filters achieved peak sensitivities of 97.8% and specificities of 98.5%. Performance of filters remained excellent in the validation phase. Conclusions Medline can be filtered for the discipline of nephrology in a reliable manner. Storing these high performance renal filters in PubMed could help clinicians with their everyday searching. Filters can also be developed for other clinical disciplines by using similar methods. |
format | Text |
id | pubmed-2746885 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | BMJ Publishing Group Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-27468852010-01-07 Filtering Medline for a clinical discipline: diagnostic test assessment framework Garg, Amit X Iansavichus, Arthur V Wilczynski, Nancy L Kastner, Monika Baier, Leslie A Shariff, Salimah Z Rehman, Faisal Weir, Matthew McKibbon, K Ann Haynes, R Brian BMJ Research Objective To develop and test a Medline filter that allows clinicians to search for articles within a clinical discipline, rather than searching the entire Medline database. Design Diagnostic test assessment framework with development and validation phases. Setting Sample of 4657 articles published in 2006 from 40 journals. Reviews Each article was manually reviewed, and 19.8% contained information relevant to the discipline of nephrology. The performance of 1 155 087 unique renal filters was compared with the manual review. Main outcome measures Sensitivity, specificity, precision, and accuracy of each filter. Results The best renal filters combined two to 14 terms or phrases and included the terms “kidney” with multiple endings (that is, truncation), “renal replacement therapy”, “renal dialysis”, “kidney function tests”, “renal”, “nephr” truncated, “glomerul” truncated, and “proteinuria”. These filters achieved peak sensitivities of 97.8% and specificities of 98.5%. Performance of filters remained excellent in the validation phase. Conclusions Medline can be filtered for the discipline of nephrology in a reliable manner. Storing these high performance renal filters in PubMed could help clinicians with their everyday searching. Filters can also be developed for other clinical disciplines by using similar methods. BMJ Publishing Group Ltd. 2009-09-18 /pmc/articles/PMC2746885/ /pubmed/19767336 http://dx.doi.org/10.1136/bmj.b3435 Text en This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited, the use is non commercial and is otherwise in compliance with the license. See: http://creativecommons.org/licenses/by-nc/2.0/ and http://creativecommons.org/licenses/by-nc/2.0/legalcode. |
spellingShingle | Research Garg, Amit X Iansavichus, Arthur V Wilczynski, Nancy L Kastner, Monika Baier, Leslie A Shariff, Salimah Z Rehman, Faisal Weir, Matthew McKibbon, K Ann Haynes, R Brian Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title | Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title_full | Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title_fullStr | Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title_full_unstemmed | Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title_short | Filtering Medline for a clinical discipline: diagnostic test assessment framework |
title_sort | filtering medline for a clinical discipline: diagnostic test assessment framework |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746885/ https://www.ncbi.nlm.nih.gov/pubmed/19767336 http://dx.doi.org/10.1136/bmj.b3435 |
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