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Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study
BACKGROUND: Normal tension glaucoma is a major subtype of glaucoma, associated with intraocular pressures that are within the statistically normal range of the population. Monogenic forms following classical inheritance patterns are rare in this glaucoma subtype. Instead, multigenic inheritance is p...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2751751/ https://www.ncbi.nlm.nih.gov/pubmed/19754948 http://dx.doi.org/10.1186/1471-2350-10-91 |
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author | Wolf, Christiane Gramer, Eugen Müller-Myhsok, Bertram Pasutto, Francesca Reinthal, Eva Wissinger, Bernd Weisschuh, Nicole |
author_facet | Wolf, Christiane Gramer, Eugen Müller-Myhsok, Bertram Pasutto, Francesca Reinthal, Eva Wissinger, Bernd Weisschuh, Nicole |
author_sort | Wolf, Christiane |
collection | PubMed |
description | BACKGROUND: Normal tension glaucoma is a major subtype of glaucoma, associated with intraocular pressures that are within the statistically normal range of the population. Monogenic forms following classical inheritance patterns are rare in this glaucoma subtype. Instead, multigenic inheritance is proposed for the majority of cases. The present study tested common sequence variants in candidate genes for association with normal tension glaucoma in the German population. METHODS: Ninety-eight SNPs were selected to tag the common genetic variation in nine genes, namely OPTN (optineurin), RDX (radixin), SNX16 (sorting nexin 16), OPA1 (optic atrophy 1), MFN1 (mitofusin 1), MFN2 (mitofusin 2), PARL (presenilin associated, rhomboid-like), SOD2 (superoxide dismutase 2, mitochondrial) and CYP1B1 (cytochrome P450, family 1, subfamily B, polypeptide 1). These SNPs were genotyped in 285 cases and 282 fully evaluated matched controls. Statistical analyses comprised single polymorphism association as well as haplogroup based association testing. RESULTS: Results suggested that genetic variation in five of the candidate genes (RDX, SNX16, OPA1, SOD2 and CYP1B1) is unlikely to confer major risk to develop normal tension glaucoma in the German population. In contrast, we observed a trend towards association of single SNPs in OPTN, MFN1, MFN2 and PARL. The SNPs of OPTN, MFN2 and PARL were further analysed by multimarker haplotype-based association testing. We identified a risk haplotype being more frequent in patients and a vice versa situation for the complementary protective haplotype in each of the three genes. CONCLUSION: Common variants of OPTN, PARL, MFN1 and MFN2 should be analysed in other cohorts to confirm their involvement in normal tension glaucoma. |
format | Text |
id | pubmed-2751751 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-27517512009-09-25 Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study Wolf, Christiane Gramer, Eugen Müller-Myhsok, Bertram Pasutto, Francesca Reinthal, Eva Wissinger, Bernd Weisschuh, Nicole BMC Med Genet Research Article BACKGROUND: Normal tension glaucoma is a major subtype of glaucoma, associated with intraocular pressures that are within the statistically normal range of the population. Monogenic forms following classical inheritance patterns are rare in this glaucoma subtype. Instead, multigenic inheritance is proposed for the majority of cases. The present study tested common sequence variants in candidate genes for association with normal tension glaucoma in the German population. METHODS: Ninety-eight SNPs were selected to tag the common genetic variation in nine genes, namely OPTN (optineurin), RDX (radixin), SNX16 (sorting nexin 16), OPA1 (optic atrophy 1), MFN1 (mitofusin 1), MFN2 (mitofusin 2), PARL (presenilin associated, rhomboid-like), SOD2 (superoxide dismutase 2, mitochondrial) and CYP1B1 (cytochrome P450, family 1, subfamily B, polypeptide 1). These SNPs were genotyped in 285 cases and 282 fully evaluated matched controls. Statistical analyses comprised single polymorphism association as well as haplogroup based association testing. RESULTS: Results suggested that genetic variation in five of the candidate genes (RDX, SNX16, OPA1, SOD2 and CYP1B1) is unlikely to confer major risk to develop normal tension glaucoma in the German population. In contrast, we observed a trend towards association of single SNPs in OPTN, MFN1, MFN2 and PARL. The SNPs of OPTN, MFN2 and PARL were further analysed by multimarker haplotype-based association testing. We identified a risk haplotype being more frequent in patients and a vice versa situation for the complementary protective haplotype in each of the three genes. CONCLUSION: Common variants of OPTN, PARL, MFN1 and MFN2 should be analysed in other cohorts to confirm their involvement in normal tension glaucoma. BioMed Central 2009-09-15 /pmc/articles/PMC2751751/ /pubmed/19754948 http://dx.doi.org/10.1186/1471-2350-10-91 Text en Copyright © 2009 Wolf et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Wolf, Christiane Gramer, Eugen Müller-Myhsok, Bertram Pasutto, Francesca Reinthal, Eva Wissinger, Bernd Weisschuh, Nicole Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title | Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title_full | Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title_fullStr | Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title_full_unstemmed | Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title_short | Evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
title_sort | evaluation of nine candidate genes in patients with normal tension glaucoma: a case control study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2751751/ https://www.ncbi.nlm.nih.gov/pubmed/19754948 http://dx.doi.org/10.1186/1471-2350-10-91 |
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