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PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees
Summary: Evolutionary biologists are often interested in finding correlations among biological traits across a number of species, as such correlations may lead to testable hypotheses about the underlying function. Because some species are more closely related than others, computing and visualizing t...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2752614/ https://www.ncbi.nlm.nih.gov/pubmed/19633096 http://dx.doi.org/10.1093/bioinformatics/btp454 |
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author | Lee, Bongshin Nachmanson, Lev Robertson, George Carlson, Jonathan M. Heckerman, David |
author_facet | Lee, Bongshin Nachmanson, Lev Robertson, George Carlson, Jonathan M. Heckerman, David |
author_sort | Lee, Bongshin |
collection | PubMed |
description | Summary: Evolutionary biologists are often interested in finding correlations among biological traits across a number of species, as such correlations may lead to testable hypotheses about the underlying function. Because some species are more closely related than others, computing and visualizing these correlations must be done in the context of the evolutionary tree that relates species. In this note, we introduce PhyloDet (short for PhyloDetective), an evolutionary tree visualization tool that enables biologists to visualize multiple traits mapped to the tree. Availability: http://research.microsoft.com/cue/phylodet/ Contact: bongshin@microsoft.com. |
format | Text |
id | pubmed-2752614 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27526142009-10-01 PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees Lee, Bongshin Nachmanson, Lev Robertson, George Carlson, Jonathan M. Heckerman, David Bioinformatics Applications Note Summary: Evolutionary biologists are often interested in finding correlations among biological traits across a number of species, as such correlations may lead to testable hypotheses about the underlying function. Because some species are more closely related than others, computing and visualizing these correlations must be done in the context of the evolutionary tree that relates species. In this note, we introduce PhyloDet (short for PhyloDetective), an evolutionary tree visualization tool that enables biologists to visualize multiple traits mapped to the tree. Availability: http://research.microsoft.com/cue/phylodet/ Contact: bongshin@microsoft.com. Oxford University Press 2009-10-01 2009-07-24 /pmc/articles/PMC2752614/ /pubmed/19633096 http://dx.doi.org/10.1093/bioinformatics/btp454 Text en http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Applications Note Lee, Bongshin Nachmanson, Lev Robertson, George Carlson, Jonathan M. Heckerman, David PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title | PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title_full | PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title_fullStr | PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title_full_unstemmed | PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title_short | PhyloDet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
title_sort | phylodet: a scalable visualization tool for mapping multiple traits to large evolutionary trees |
topic | Applications Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2752614/ https://www.ncbi.nlm.nih.gov/pubmed/19633096 http://dx.doi.org/10.1093/bioinformatics/btp454 |
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