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Reuse of terminological resources for efficient ontological engineering in Life Sciences

This paper is intended to explore how to use terminological resources for ontology engineering. Nowadays there are several biomedical ontologies describing overlapping domains, but there is not a clear correspondence between the concepts that are supposed to be equivalent or just similar. These reso...

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Detalles Bibliográficos
Autores principales: Jimeno-Yepes, Antonio, Jiménez-Ruiz, Ernesto, Berlanga-Llavori, Rafael, Rebholz-Schuhmann, Dietrich
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2755825/
https://www.ncbi.nlm.nih.gov/pubmed/19796401
http://dx.doi.org/10.1186/1471-2105-10-S10-S4
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author Jimeno-Yepes, Antonio
Jiménez-Ruiz, Ernesto
Berlanga-Llavori, Rafael
Rebholz-Schuhmann, Dietrich
author_facet Jimeno-Yepes, Antonio
Jiménez-Ruiz, Ernesto
Berlanga-Llavori, Rafael
Rebholz-Schuhmann, Dietrich
author_sort Jimeno-Yepes, Antonio
collection PubMed
description This paper is intended to explore how to use terminological resources for ontology engineering. Nowadays there are several biomedical ontologies describing overlapping domains, but there is not a clear correspondence between the concepts that are supposed to be equivalent or just similar. These resources are quite precious but their integration and further development are expensive. Terminologies may support the ontological development in several stages of the lifecycle of the ontology; e.g. ontology integration. In this paper we investigate the use of terminological resources during the ontology lifecycle. We claim that the proper creation and use of a shared thesaurus is a cornerstone for the successful application of the Semantic Web technology within life sciences. Moreover, we have applied our approach to a real scenario, the Health-e-Child (HeC) project, and we have evaluated the impact of filtering and re-organizing several resources. As a result, we have created a reference thesaurus for this project, named HeCTh.
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spelling pubmed-27558252009-10-03 Reuse of terminological resources for efficient ontological engineering in Life Sciences Jimeno-Yepes, Antonio Jiménez-Ruiz, Ernesto Berlanga-Llavori, Rafael Rebholz-Schuhmann, Dietrich BMC Bioinformatics Research This paper is intended to explore how to use terminological resources for ontology engineering. Nowadays there are several biomedical ontologies describing overlapping domains, but there is not a clear correspondence between the concepts that are supposed to be equivalent or just similar. These resources are quite precious but their integration and further development are expensive. Terminologies may support the ontological development in several stages of the lifecycle of the ontology; e.g. ontology integration. In this paper we investigate the use of terminological resources during the ontology lifecycle. We claim that the proper creation and use of a shared thesaurus is a cornerstone for the successful application of the Semantic Web technology within life sciences. Moreover, we have applied our approach to a real scenario, the Health-e-Child (HeC) project, and we have evaluated the impact of filtering and re-organizing several resources. As a result, we have created a reference thesaurus for this project, named HeCTh. BioMed Central 2009-10-01 /pmc/articles/PMC2755825/ /pubmed/19796401 http://dx.doi.org/10.1186/1471-2105-10-S10-S4 Text en © Jimeno-Yepes et al; licensee BioMed Central Ltd. 2009 https://creativecommons.org/licenses/by/2.0/This article is published under license to BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0 (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Jimeno-Yepes, Antonio
Jiménez-Ruiz, Ernesto
Berlanga-Llavori, Rafael
Rebholz-Schuhmann, Dietrich
Reuse of terminological resources for efficient ontological engineering in Life Sciences
title Reuse of terminological resources for efficient ontological engineering in Life Sciences
title_full Reuse of terminological resources for efficient ontological engineering in Life Sciences
title_fullStr Reuse of terminological resources for efficient ontological engineering in Life Sciences
title_full_unstemmed Reuse of terminological resources for efficient ontological engineering in Life Sciences
title_short Reuse of terminological resources for efficient ontological engineering in Life Sciences
title_sort reuse of terminological resources for efficient ontological engineering in life sciences
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2755825/
https://www.ncbi.nlm.nih.gov/pubmed/19796401
http://dx.doi.org/10.1186/1471-2105-10-S10-S4
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