Cargando…

Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding

BACKGROUND: The human noroviruses are a highly diverse group of viruses with a single-stranded RNA genome encoding a single major structural protein (VP1), which has a hypervariable domain (P2 domain) as the most exposed part of the virion. The noroviruses are classified on the basis of nucleotide s...

Descripción completa

Detalles Bibliográficos
Autores principales: Allen, David J, Noad, Rob, Samuel, Dhan, Gray, Jim J, Roy, Polly, Iturriza-Gómara, Miren
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2762976/
https://www.ncbi.nlm.nih.gov/pubmed/19781066
http://dx.doi.org/10.1186/1743-422X-6-150
_version_ 1782172968803106816
author Allen, David J
Noad, Rob
Samuel, Dhan
Gray, Jim J
Roy, Polly
Iturriza-Gómara, Miren
author_facet Allen, David J
Noad, Rob
Samuel, Dhan
Gray, Jim J
Roy, Polly
Iturriza-Gómara, Miren
author_sort Allen, David J
collection PubMed
description BACKGROUND: The human noroviruses are a highly diverse group of viruses with a single-stranded RNA genome encoding a single major structural protein (VP1), which has a hypervariable domain (P2 domain) as the most exposed part of the virion. The noroviruses are classified on the basis of nucleotide sequence diversity in the VP1-encoding ORF2 gene, which divides the majority of human noroviruses into two genogroups (GI and GII). GII-4 noroviruses are the major aetiological agent of outbreaks of gastroenteritis around the world. During a winter season the diversity among the GII-4 noroviruses has been shown to fluctuate, driving the appearance of new virus variants in the population. We have previously shown that sequence data and in silico modelling experiments suggest there are two surface-exposed sites (site A and site B) in the hypervariable P2 domain. We predict these sites may form a functional variant-specific epitope that evolves under selective pressure from the host immune response and gives rise to antibody escape mutants. RESULTS: In this paper, we describe the construction of recombinant baculoviruses to express VLPs representing one pre-epidemic and one epidemic variant of GII-4 noroviruses, and the production of monoclonal antibodies against them. We use these novel reagents to provide evidence that site A and site B form a conformational, variant-specific, surface-exposed site on the GII-4 norovirus capsid that is involved in antibody binding. CONCLUSION: As predicted by our earlier study, significant amino acid changes at site A and site B give rise to GII-4 norovirus epidemic variants that are antibody escape mutants.
format Text
id pubmed-2762976
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-27629762009-10-17 Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding Allen, David J Noad, Rob Samuel, Dhan Gray, Jim J Roy, Polly Iturriza-Gómara, Miren Virol J Research BACKGROUND: The human noroviruses are a highly diverse group of viruses with a single-stranded RNA genome encoding a single major structural protein (VP1), which has a hypervariable domain (P2 domain) as the most exposed part of the virion. The noroviruses are classified on the basis of nucleotide sequence diversity in the VP1-encoding ORF2 gene, which divides the majority of human noroviruses into two genogroups (GI and GII). GII-4 noroviruses are the major aetiological agent of outbreaks of gastroenteritis around the world. During a winter season the diversity among the GII-4 noroviruses has been shown to fluctuate, driving the appearance of new virus variants in the population. We have previously shown that sequence data and in silico modelling experiments suggest there are two surface-exposed sites (site A and site B) in the hypervariable P2 domain. We predict these sites may form a functional variant-specific epitope that evolves under selective pressure from the host immune response and gives rise to antibody escape mutants. RESULTS: In this paper, we describe the construction of recombinant baculoviruses to express VLPs representing one pre-epidemic and one epidemic variant of GII-4 noroviruses, and the production of monoclonal antibodies against them. We use these novel reagents to provide evidence that site A and site B form a conformational, variant-specific, surface-exposed site on the GII-4 norovirus capsid that is involved in antibody binding. CONCLUSION: As predicted by our earlier study, significant amino acid changes at site A and site B give rise to GII-4 norovirus epidemic variants that are antibody escape mutants. BioMed Central 2009-09-25 /pmc/articles/PMC2762976/ /pubmed/19781066 http://dx.doi.org/10.1186/1743-422X-6-150 Text en Copyright © 2009 Allen et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Allen, David J
Noad, Rob
Samuel, Dhan
Gray, Jim J
Roy, Polly
Iturriza-Gómara, Miren
Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title_full Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title_fullStr Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title_full_unstemmed Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title_short Characterisation of a GII-4 norovirus variant-specific surface-exposed site involved in antibody binding
title_sort characterisation of a gii-4 norovirus variant-specific surface-exposed site involved in antibody binding
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2762976/
https://www.ncbi.nlm.nih.gov/pubmed/19781066
http://dx.doi.org/10.1186/1743-422X-6-150
work_keys_str_mv AT allendavidj characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding
AT noadrob characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding
AT samueldhan characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding
AT grayjimj characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding
AT roypolly characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding
AT iturrizagomaramiren characterisationofagii4norovirusvariantspecificsurfaceexposedsiteinvolvedinantibodybinding