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Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy

OBJECTIVE: To examine the association between single nucleotide polymorphisms (SNPs) in the engulfment and cell motility 1 (ELMO1) gene, a locus previously shown to be associated with diabetic nephropathy in two ethnically distinct type 2 diabetic populations, and the risk of nephropathy in type 1 d...

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Autores principales: Pezzolesi, Marcus G., Katavetin, Pisut, Kure, Masahiko, Poznik, G. David, Skupien, Jan, Mychaleckyj, Josyf C., Rich, Stephen S., Warram, James H., Krolewski, Andrzej S.
Formato: Texto
Lenguaje:English
Publicado: American Diabetes Association 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2768169/
https://www.ncbi.nlm.nih.gov/pubmed/19651817
http://dx.doi.org/10.2337/db09-0641
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author Pezzolesi, Marcus G.
Katavetin, Pisut
Kure, Masahiko
Poznik, G. David
Skupien, Jan
Mychaleckyj, Josyf C.
Rich, Stephen S.
Warram, James H.
Krolewski, Andrzej S.
author_facet Pezzolesi, Marcus G.
Katavetin, Pisut
Kure, Masahiko
Poznik, G. David
Skupien, Jan
Mychaleckyj, Josyf C.
Rich, Stephen S.
Warram, James H.
Krolewski, Andrzej S.
author_sort Pezzolesi, Marcus G.
collection PubMed
description OBJECTIVE: To examine the association between single nucleotide polymorphisms (SNPs) in the engulfment and cell motility 1 (ELMO1) gene, a locus previously shown to be associated with diabetic nephropathy in two ethnically distinct type 2 diabetic populations, and the risk of nephropathy in type 1 diabetes. RESEARCH DESIGN AND METHODS: Genotypic data from a genome-wide association scan (GWAS) of the Genetics of Kidneys in Diabetes (GoKinD) study collection were analyzed for associations across the ELMO1 locus. In total, genetic associations were assessed using 118 SNPs and 1,705 individuals of European ancestry with type 1 diabetes (885 normoalbuminuric control subjects and 820 advanced diabetic nephropathy case subjects). RESULTS: The strongest associations in ELMO1 occurred at rs11769038 (odds ratio [OR] 1.24; P = 1.7 × 10(−3)) and rs1882080 (OR 1.23; P = 3.2 × 10(−3)) located in intron 16. Two additional SNPs, located in introns 18 and 20, respectively, were also associated with diabetic nephropathy. No evidence of association for variants previously reported in type 2 diabetes was observed in our collection. CONCLUSIONS: Using GWAS data from the GoKinD collection, we comprehensively examined evidence of association across the ELMO1 locus. Our investigation marks the third report of associations in ELMO1 with diabetic nephropathy, further establishing its role in the susceptibility of this disease. There is evidence of allelic heterogeneity, contributed by the diverse genetic backgrounds of the different ethnic groups examined. Further investigation of SNPs at this locus is necessary to fully understand the commonality of these associations and the mechanism(s) underlying their role in diabetic nephropathy.
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spelling pubmed-27681692010-11-01 Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy Pezzolesi, Marcus G. Katavetin, Pisut Kure, Masahiko Poznik, G. David Skupien, Jan Mychaleckyj, Josyf C. Rich, Stephen S. Warram, James H. Krolewski, Andrzej S. Diabetes Original Article OBJECTIVE: To examine the association between single nucleotide polymorphisms (SNPs) in the engulfment and cell motility 1 (ELMO1) gene, a locus previously shown to be associated with diabetic nephropathy in two ethnically distinct type 2 diabetic populations, and the risk of nephropathy in type 1 diabetes. RESEARCH DESIGN AND METHODS: Genotypic data from a genome-wide association scan (GWAS) of the Genetics of Kidneys in Diabetes (GoKinD) study collection were analyzed for associations across the ELMO1 locus. In total, genetic associations were assessed using 118 SNPs and 1,705 individuals of European ancestry with type 1 diabetes (885 normoalbuminuric control subjects and 820 advanced diabetic nephropathy case subjects). RESULTS: The strongest associations in ELMO1 occurred at rs11769038 (odds ratio [OR] 1.24; P = 1.7 × 10(−3)) and rs1882080 (OR 1.23; P = 3.2 × 10(−3)) located in intron 16. Two additional SNPs, located in introns 18 and 20, respectively, were also associated with diabetic nephropathy. No evidence of association for variants previously reported in type 2 diabetes was observed in our collection. CONCLUSIONS: Using GWAS data from the GoKinD collection, we comprehensively examined evidence of association across the ELMO1 locus. Our investigation marks the third report of associations in ELMO1 with diabetic nephropathy, further establishing its role in the susceptibility of this disease. There is evidence of allelic heterogeneity, contributed by the diverse genetic backgrounds of the different ethnic groups examined. Further investigation of SNPs at this locus is necessary to fully understand the commonality of these associations and the mechanism(s) underlying their role in diabetic nephropathy. American Diabetes Association 2009-11 2009-08-03 /pmc/articles/PMC2768169/ /pubmed/19651817 http://dx.doi.org/10.2337/db09-0641 Text en © 2009 American Diabetes Association Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered. See http://creativecommons.org/licenses/by-nc-nd/3.0/ for details.
spellingShingle Original Article
Pezzolesi, Marcus G.
Katavetin, Pisut
Kure, Masahiko
Poznik, G. David
Skupien, Jan
Mychaleckyj, Josyf C.
Rich, Stephen S.
Warram, James H.
Krolewski, Andrzej S.
Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title_full Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title_fullStr Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title_full_unstemmed Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title_short Confirmation of Genetic Associations at ELMO1 in the GoKinD Collection Supports Its Role as a Susceptibility Gene in Diabetic Nephropathy
title_sort confirmation of genetic associations at elmo1 in the gokind collection supports its role as a susceptibility gene in diabetic nephropathy
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2768169/
https://www.ncbi.nlm.nih.gov/pubmed/19651817
http://dx.doi.org/10.2337/db09-0641
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