Cargando…
De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data
Sequencing-by-synthesis technologies can reduce the cost of generating de novo genome assemblies. We report a method for assembling draft genome sequences of eukaryotic organisms that integrates sequence information from different sources, and demonstrate its effectiveness by assembling an approxima...
Autores principales: | DiGuistini, Scott, Liao, Nancy Y, Platt, Darren, Robertson, Gordon, Seidel, Michael, Chan, Simon K, Docking, T Roderick, Birol, Inanc, Holt, Robert A, Hirst, Martin, Mardis, Elaine, Marra, Marco A, Hamelin, Richard C, Bohlmann, Jörg, Breuil, Colette, Jones, Steven JM |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2768983/ https://www.ncbi.nlm.nih.gov/pubmed/19747388 http://dx.doi.org/10.1186/gb-2009-10-9-r94 |
Ejemplares similares
-
Gene discovery for the bark beetle-vectored fungal tree pathogen Grosmannia clavigera
por: Hesse-Orce, Uljana, et al.
Publicado: (2010) -
Unequal Recombination and Evolution of the Mating-Type (MAT) Loci in the Pathogenic Fungus Grosmannia clavigera and Relatives
por: Tsui, Clement K.-M., et al.
Publicado: (2013) -
The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera
por: Haridas, Sajeet, et al.
Publicado: (2013) -
iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences
por: Zheng, Yi, et al.
Publicado: (2011) -
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants
por: Cock, Peter J. A., et al.
Publicado: (2010)