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Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps

BACKGROUND: Given its sequenced genome and efficient systemic RNA interference response, the red flour beetle Tribolium castaneum is a model organism well suited for reverse genetics. Even so, there is a pressing need for forward genetic analysis to escape the bias inherent in candidate gene approac...

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Autores principales: Trauner, Jochen, Schinko, Johannes, Lorenzen, Marcé D, Shippy, Teresa D, Wimmer, Ernst A, Beeman, Richard W, Klingler, Martin, Bucher, Gregor, Brown, Susan J
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2779179/
https://www.ncbi.nlm.nih.gov/pubmed/19891766
http://dx.doi.org/10.1186/1741-7007-7-73
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author Trauner, Jochen
Schinko, Johannes
Lorenzen, Marcé D
Shippy, Teresa D
Wimmer, Ernst A
Beeman, Richard W
Klingler, Martin
Bucher, Gregor
Brown, Susan J
author_facet Trauner, Jochen
Schinko, Johannes
Lorenzen, Marcé D
Shippy, Teresa D
Wimmer, Ernst A
Beeman, Richard W
Klingler, Martin
Bucher, Gregor
Brown, Susan J
author_sort Trauner, Jochen
collection PubMed
description BACKGROUND: Given its sequenced genome and efficient systemic RNA interference response, the red flour beetle Tribolium castaneum is a model organism well suited for reverse genetics. Even so, there is a pressing need for forward genetic analysis to escape the bias inherent in candidate gene approaches. RESULTS: To produce easy-to-maintain insertional mutations and to obtain fluorescent marker lines to aid phenotypic analysis, we undertook a large-scale transposon mutagenesis screen. In this screen, we produced more than 6,500 new piggyBac insertions. Of these, 421 proved to be recessive lethal, 75 were semi-lethal, and eight indicated recessive sterility, while 505 showed new enhancer-trap patterns. Insertion junctions were determined for 403 lines and often appeared to be located within transcription units. Insertion sites appeared to be randomly distributed throughout the genome, with the exception of a preference for reinsertion near the donor site. CONCLUSION: A large collection of enhancer-trap and embryonic lethal beetle lines has been made available to the research community and will foster investigations into diverse fields of insect biology, pest control, and evolution. Because the genetic elements used in this screen are species-nonspecific, and because the crossing scheme does not depend on balancer chromosomes, the methods presented herein should be broadly applicable for many insect species.
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spelling pubmed-27791792009-11-19 Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps Trauner, Jochen Schinko, Johannes Lorenzen, Marcé D Shippy, Teresa D Wimmer, Ernst A Beeman, Richard W Klingler, Martin Bucher, Gregor Brown, Susan J BMC Biol Research article BACKGROUND: Given its sequenced genome and efficient systemic RNA interference response, the red flour beetle Tribolium castaneum is a model organism well suited for reverse genetics. Even so, there is a pressing need for forward genetic analysis to escape the bias inherent in candidate gene approaches. RESULTS: To produce easy-to-maintain insertional mutations and to obtain fluorescent marker lines to aid phenotypic analysis, we undertook a large-scale transposon mutagenesis screen. In this screen, we produced more than 6,500 new piggyBac insertions. Of these, 421 proved to be recessive lethal, 75 were semi-lethal, and eight indicated recessive sterility, while 505 showed new enhancer-trap patterns. Insertion junctions were determined for 403 lines and often appeared to be located within transcription units. Insertion sites appeared to be randomly distributed throughout the genome, with the exception of a preference for reinsertion near the donor site. CONCLUSION: A large collection of enhancer-trap and embryonic lethal beetle lines has been made available to the research community and will foster investigations into diverse fields of insect biology, pest control, and evolution. Because the genetic elements used in this screen are species-nonspecific, and because the crossing scheme does not depend on balancer chromosomes, the methods presented herein should be broadly applicable for many insect species. BioMed Central 2009-11-05 /pmc/articles/PMC2779179/ /pubmed/19891766 http://dx.doi.org/10.1186/1741-7007-7-73 Text en Copyright ©2009 Trauner et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research article
Trauner, Jochen
Schinko, Johannes
Lorenzen, Marcé D
Shippy, Teresa D
Wimmer, Ernst A
Beeman, Richard W
Klingler, Martin
Bucher, Gregor
Brown, Susan J
Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title_full Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title_fullStr Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title_full_unstemmed Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title_short Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
title_sort large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2779179/
https://www.ncbi.nlm.nih.gov/pubmed/19891766
http://dx.doi.org/10.1186/1741-7007-7-73
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