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Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data
Motivation: Next-generation sequencing has become an important tool for genome-wide quantification of DNA and RNA. However, a major technical hurdle lies in the need to map short sequence reads back to their correct locations in a reference genome. Here, we investigate the impact of SNP variation on...
Autores principales: | Degner, Jacob F., Marioni, John C., Pai, Athma A., Pickrell, Joseph K., Nkadori, Everlyne, Gilad, Yoav, Pritchard, Jonathan K. |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788925/ https://www.ncbi.nlm.nih.gov/pubmed/19808877 http://dx.doi.org/10.1093/bioinformatics/btp579 |
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