NAViGaTOR: Network Analysis, Visualization and Graphing Toronto

Summary: NAViGaTOR is a powerful graphing application for the 2D and 3D visualization of biological networks. NAViGaTOR includes a rich suite of visual mark-up tools for manual and automated annotation, fast and scalable layout algorithms and OpenGL hardware acceleration to facilitate the visualizat...

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Detalles Bibliográficos
Autores principales: Brown, Kevin R., Otasek, David, Ali, Muhammad, McGuffin, Michael J., Xie, Wing, Devani, Baiju, van Toch, Ian Lawson, Jurisica, Igor
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788933/
https://www.ncbi.nlm.nih.gov/pubmed/19837718
http://dx.doi.org/10.1093/bioinformatics/btp595
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author Brown, Kevin R.
Otasek, David
Ali, Muhammad
McGuffin, Michael J.
Xie, Wing
Devani, Baiju
van Toch, Ian Lawson
Jurisica, Igor
author_facet Brown, Kevin R.
Otasek, David
Ali, Muhammad
McGuffin, Michael J.
Xie, Wing
Devani, Baiju
van Toch, Ian Lawson
Jurisica, Igor
author_sort Brown, Kevin R.
collection PubMed
description Summary: NAViGaTOR is a powerful graphing application for the 2D and 3D visualization of biological networks. NAViGaTOR includes a rich suite of visual mark-up tools for manual and automated annotation, fast and scalable layout algorithms and OpenGL hardware acceleration to facilitate the visualization of large graphs. Publication-quality images can be rendered through SVG graphics export. NAViGaTOR supports community-developed data formats (PSI-XML, BioPax and GML), is platform-independent and is extensible through a plug-in architecture. Availability: NAViGaTOR is freely available to the research community from http://ophid.utoronto.ca/navigator/. Installers and documentation are provided for 32- and 64-bit Windows, Mac, Linux and Unix. Contact: juris@ai.utoronto.ca Supplementary information: Supplementary data are available at Bioinformatics online.
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spelling pubmed-27889332009-12-07 NAViGaTOR: Network Analysis, Visualization and Graphing Toronto Brown, Kevin R. Otasek, David Ali, Muhammad McGuffin, Michael J. Xie, Wing Devani, Baiju van Toch, Ian Lawson Jurisica, Igor Bioinformatics Applications Note Summary: NAViGaTOR is a powerful graphing application for the 2D and 3D visualization of biological networks. NAViGaTOR includes a rich suite of visual mark-up tools for manual and automated annotation, fast and scalable layout algorithms and OpenGL hardware acceleration to facilitate the visualization of large graphs. Publication-quality images can be rendered through SVG graphics export. NAViGaTOR supports community-developed data formats (PSI-XML, BioPax and GML), is platform-independent and is extensible through a plug-in architecture. Availability: NAViGaTOR is freely available to the research community from http://ophid.utoronto.ca/navigator/. Installers and documentation are provided for 32- and 64-bit Windows, Mac, Linux and Unix. Contact: juris@ai.utoronto.ca Supplementary information: Supplementary data are available at Bioinformatics online. Oxford University Press 2009-12-15 2009-10-16 /pmc/articles/PMC2788933/ /pubmed/19837718 http://dx.doi.org/10.1093/bioinformatics/btp595 Text en http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Brown, Kevin R.
Otasek, David
Ali, Muhammad
McGuffin, Michael J.
Xie, Wing
Devani, Baiju
van Toch, Ian Lawson
Jurisica, Igor
NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title_full NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title_fullStr NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title_full_unstemmed NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title_short NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
title_sort navigator: network analysis, visualization and graphing toronto
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788933/
https://www.ncbi.nlm.nih.gov/pubmed/19837718
http://dx.doi.org/10.1093/bioinformatics/btp595
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AT devanibaiju navigatornetworkanalysisvisualizationandgraphingtoronto
AT vantochianlawson navigatornetworkanalysisvisualizationandgraphingtoronto
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