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DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels

DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcri...

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Detalles Bibliográficos
Autores principales: Yu, Hui, Yu, Fu-Dong, Zhang, Guo-Qing, Shen, Xiang, Chen, Yun-Qin, Li, Yuan-Yuan, Li, Yi-Xue
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790303/
https://www.ncbi.nlm.nih.gov/pubmed/20157479
http://dx.doi.org/10.1093/database/bap006
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author Yu, Hui
Yu, Fu-Dong
Zhang, Guo-Qing
Shen, Xiang
Chen, Yun-Qin
Li, Yuan-Yuan
Li, Yi-Xue
author_facet Yu, Hui
Yu, Fu-Dong
Zhang, Guo-Qing
Shen, Xiang
Chen, Yun-Qin
Li, Yuan-Yuan
Li, Yi-Xue
author_sort Yu, Hui
collection PubMed
description DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcription factor binding sites, as well as functional terms and genetic disorders. In addition, the expression correlation information based on 117 microarray datasets is included. By providing user-friendly access to these data, DBH2H represents a valuable resource for further analyses of this important gene arrangement in terms of transcriptional regulation mechanisms, evolutionary conservation, disease relevance, etc. Database URL: http://lifecenter.sgst.cn/h2h/
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spelling pubmed-27903032009-12-08 DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels Yu, Hui Yu, Fu-Dong Zhang, Guo-Qing Shen, Xiang Chen, Yun-Qin Li, Yuan-Yuan Li, Yi-Xue Database (Oxford) Original Article DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcription factor binding sites, as well as functional terms and genetic disorders. In addition, the expression correlation information based on 117 microarray datasets is included. By providing user-friendly access to these data, DBH2H represents a valuable resource for further analyses of this important gene arrangement in terms of transcriptional regulation mechanisms, evolutionary conservation, disease relevance, etc. Database URL: http://lifecenter.sgst.cn/h2h/ Oxford University Press 2009 2009-06-02 /pmc/articles/PMC2790303/ /pubmed/20157479 http://dx.doi.org/10.1093/database/bap006 Text en © 2009 The Author(s). http://creativecommons.org/licenses/by-nc/2.0/uk/ This is Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Yu, Hui
Yu, Fu-Dong
Zhang, Guo-Qing
Shen, Xiang
Chen, Yun-Qin
Li, Yuan-Yuan
Li, Yi-Xue
DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title_full DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title_fullStr DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title_full_unstemmed DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title_short DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
title_sort dbh2h: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790303/
https://www.ncbi.nlm.nih.gov/pubmed/20157479
http://dx.doi.org/10.1093/database/bap006
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