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DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels
DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcri...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790303/ https://www.ncbi.nlm.nih.gov/pubmed/20157479 http://dx.doi.org/10.1093/database/bap006 |
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author | Yu, Hui Yu, Fu-Dong Zhang, Guo-Qing Shen, Xiang Chen, Yun-Qin Li, Yuan-Yuan Li, Yi-Xue |
author_facet | Yu, Hui Yu, Fu-Dong Zhang, Guo-Qing Shen, Xiang Chen, Yun-Qin Li, Yuan-Yuan Li, Yi-Xue |
author_sort | Yu, Hui |
collection | PubMed |
description | DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcription factor binding sites, as well as functional terms and genetic disorders. In addition, the expression correlation information based on 117 microarray datasets is included. By providing user-friendly access to these data, DBH2H represents a valuable resource for further analyses of this important gene arrangement in terms of transcriptional regulation mechanisms, evolutionary conservation, disease relevance, etc. Database URL: http://lifecenter.sgst.cn/h2h/ |
format | Text |
id | pubmed-2790303 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27903032009-12-08 DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels Yu, Hui Yu, Fu-Dong Zhang, Guo-Qing Shen, Xiang Chen, Yun-Qin Li, Yuan-Yuan Li, Yi-Xue Database (Oxford) Original Article DBH2H collects head-to-head (h2h) gene pairs identified from human, mouse, rat, chicken and fugu genomes, and distinguishes the ortholog mapping relationship among them. The gene pairs in DBH2H are annotated with sequential features including single nucleotide polymorphisms, CpG islands and transcription factor binding sites, as well as functional terms and genetic disorders. In addition, the expression correlation information based on 117 microarray datasets is included. By providing user-friendly access to these data, DBH2H represents a valuable resource for further analyses of this important gene arrangement in terms of transcriptional regulation mechanisms, evolutionary conservation, disease relevance, etc. Database URL: http://lifecenter.sgst.cn/h2h/ Oxford University Press 2009 2009-06-02 /pmc/articles/PMC2790303/ /pubmed/20157479 http://dx.doi.org/10.1093/database/bap006 Text en © 2009 The Author(s). http://creativecommons.org/licenses/by-nc/2.0/uk/ This is Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Yu, Hui Yu, Fu-Dong Zhang, Guo-Qing Shen, Xiang Chen, Yun-Qin Li, Yuan-Yuan Li, Yi-Xue DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title | DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title_full | DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title_fullStr | DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title_full_unstemmed | DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title_short | DBH2H: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
title_sort | dbh2h: vertebrate head-to-head gene pairs annotated at genomic and post-genomic levels |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790303/ https://www.ncbi.nlm.nih.gov/pubmed/20157479 http://dx.doi.org/10.1093/database/bap006 |
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