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Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex s...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790613/ https://www.ncbi.nlm.nih.gov/pubmed/20016778 http://dx.doi.org/10.1371/journal.pone.0008332 |
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author | Alexandrov, Ludmil B. Alexandrova, Stoyana Usheva, Anny |
author_facet | Alexandrov, Ludmil B. Alexandrova, Stoyana Usheva, Anny |
author_sort | Alexandrov, Ludmil B. |
collection | PubMed |
description | Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex systems is by simulating them with phenomenological models such as the well-known evolutionary agent-based model (EABM). Here we developed an EABM to simulate cell colonies as a multi-agent system that adapts to hyper-gravity in starvation conditions. In the model, the cell's heritable characteristics are generated and transferred randomly to offspring cells. After a qualitative validation of the model at normal gravity, we simulate cellular growth in hyper-gravity conditions. The obtained data are consistent with previously confirmed theoretical and experimental findings for bacterial behavior in environmental changes, including the experimental data from the microgravity Atlantis and the Hypergravity 3000 experiments. Our results demonstrate that it is possible to utilize an EABM with realistic qualitative description to examine the effects of hypergravity and starvation on complex cellular entities. |
format | Text |
id | pubmed-2790613 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-27906132009-12-17 Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures Alexandrov, Ludmil B. Alexandrova, Stoyana Usheva, Anny PLoS One Research Article Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex systems is by simulating them with phenomenological models such as the well-known evolutionary agent-based model (EABM). Here we developed an EABM to simulate cell colonies as a multi-agent system that adapts to hyper-gravity in starvation conditions. In the model, the cell's heritable characteristics are generated and transferred randomly to offspring cells. After a qualitative validation of the model at normal gravity, we simulate cellular growth in hyper-gravity conditions. The obtained data are consistent with previously confirmed theoretical and experimental findings for bacterial behavior in environmental changes, including the experimental data from the microgravity Atlantis and the Hypergravity 3000 experiments. Our results demonstrate that it is possible to utilize an EABM with realistic qualitative description to examine the effects of hypergravity and starvation on complex cellular entities. Public Library of Science 2009-12-16 /pmc/articles/PMC2790613/ /pubmed/20016778 http://dx.doi.org/10.1371/journal.pone.0008332 Text en Alexandrov et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Alexandrov, Ludmil B. Alexandrova, Stoyana Usheva, Anny Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title | Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title_full | Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title_fullStr | Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title_full_unstemmed | Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title_short | Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures |
title_sort | computer modeling describes gravity-related adaptation in cell cultures |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790613/ https://www.ncbi.nlm.nih.gov/pubmed/20016778 http://dx.doi.org/10.1371/journal.pone.0008332 |
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