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Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures

Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex s...

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Detalles Bibliográficos
Autores principales: Alexandrov, Ludmil B., Alexandrova, Stoyana, Usheva, Anny
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790613/
https://www.ncbi.nlm.nih.gov/pubmed/20016778
http://dx.doi.org/10.1371/journal.pone.0008332
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author Alexandrov, Ludmil B.
Alexandrova, Stoyana
Usheva, Anny
author_facet Alexandrov, Ludmil B.
Alexandrova, Stoyana
Usheva, Anny
author_sort Alexandrov, Ludmil B.
collection PubMed
description Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex systems is by simulating them with phenomenological models such as the well-known evolutionary agent-based model (EABM). Here we developed an EABM to simulate cell colonies as a multi-agent system that adapts to hyper-gravity in starvation conditions. In the model, the cell's heritable characteristics are generated and transferred randomly to offspring cells. After a qualitative validation of the model at normal gravity, we simulate cellular growth in hyper-gravity conditions. The obtained data are consistent with previously confirmed theoretical and experimental findings for bacterial behavior in environmental changes, including the experimental data from the microgravity Atlantis and the Hypergravity 3000 experiments. Our results demonstrate that it is possible to utilize an EABM with realistic qualitative description to examine the effects of hypergravity and starvation on complex cellular entities.
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spelling pubmed-27906132009-12-17 Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures Alexandrov, Ludmil B. Alexandrova, Stoyana Usheva, Anny PLoS One Research Article Questions about the changes of biological systems in response to hostile environmental factors are important but not easy to answer. Often, the traditional description with differential equations is difficult due to the overwhelming complexity of the living systems. Another way to describe complex systems is by simulating them with phenomenological models such as the well-known evolutionary agent-based model (EABM). Here we developed an EABM to simulate cell colonies as a multi-agent system that adapts to hyper-gravity in starvation conditions. In the model, the cell's heritable characteristics are generated and transferred randomly to offspring cells. After a qualitative validation of the model at normal gravity, we simulate cellular growth in hyper-gravity conditions. The obtained data are consistent with previously confirmed theoretical and experimental findings for bacterial behavior in environmental changes, including the experimental data from the microgravity Atlantis and the Hypergravity 3000 experiments. Our results demonstrate that it is possible to utilize an EABM with realistic qualitative description to examine the effects of hypergravity and starvation on complex cellular entities. Public Library of Science 2009-12-16 /pmc/articles/PMC2790613/ /pubmed/20016778 http://dx.doi.org/10.1371/journal.pone.0008332 Text en Alexandrov et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Alexandrov, Ludmil B.
Alexandrova, Stoyana
Usheva, Anny
Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title_full Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title_fullStr Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title_full_unstemmed Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title_short Computer Modeling Describes Gravity-Related Adaptation in Cell Cultures
title_sort computer modeling describes gravity-related adaptation in cell cultures
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2790613/
https://www.ncbi.nlm.nih.gov/pubmed/20016778
http://dx.doi.org/10.1371/journal.pone.0008332
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